Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04090 ATGGCTGATAGGTACTCCCAGTTGAACGGTGCCTTCTATGGCCCTGCCATACCACCGACTACGGAGCAACGCCGCTCTAGCTACCACAATGATAGAAGCTGCTGTGGTAGTCTATTTAGCATCTTCTGGAAGATTGTTGTTGCACTCGCAATTCTCTTTGCTATCATAATAGTTATCTTTTATCTCATTGTTCAACCTCGTGCCTTCAAATTCTATGTCACGAAAGCTCAACTAACTCAATTTGACTACACAAACAACACACTACACTACAACATGGTGCTCAATTTCACAGCCCGCAACCCAAACAAAAAACTTGGCATCTATTACGATGATGTGGAGGCTCGAGCATTCTATGAAGGGTCAAGGTTTGCTATTGTTGATGTGATCACATTCAAGAACTCCTTCCGCCAAGACAAGAAGAGAAGTGATCCTATGAGTGGTGTTTTCATTGGACAACAGTTTTTGATGCTCAACAACGATCAAGTATCTGAGTTCAACAAAGATACGATTCTTGGAGTTTATGATATTCGTGTGAAGCTCTACTTCAGAATTCGGTTCAAACTTGGAGACTCAATATCTAGCAATTACAAGCCCAAGGTCAAATGCGATATCAGTATTCCCTTGAATTCTAGTAATGCCACTGTTATCTTCAACCGCATTGTGCCTAACAAGTGCCGCGTTGAACTCTAG 690 0.4203 MADRYSQLNGAFYGPAIPPTTEQRRSSYHNDRSCCGSLFSIFWKIVVALAILFAIIIVIFYLIVQPRAFKFYVTKAQLTQFDYTNNTLHYNMVLNFTARNPNKKLGIYYDDVEARAFYEGSRFAIVDVITFKNSFRQDKKRSDPMSGVFIGQQFLMLNNDQVSEFNKDTILGVYDIRVKLYFRIRFKLGDSISSNYKPKVKCDISIPLNSSNATVIFNRIVPNKCRVEL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04090 229 PANTHER OS05G0367900 PROTEIN 21 226 IPR044839 GO:0098542
Tsu07g04090 229 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 21 226 - -
Tsu07g04090 229 Pfam Late embryogenesis abundant protein 96 193 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04090 Tsu-Chr7 46734712 46735715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04090 63 214 SNARE and Associated Proteins AT1G32270 33.962 7.27e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04090 - - gmx:100795302 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04090 07 46734712 46735715 Tsu07g04090 07 46734712 46735715 ECH