Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04089 ATGGCTGATAAGTACTCGCAATTGAACGGTGTACGCACTGGCTACCATCGTGATAGAAGTTGTTGTTGCTGTCTCATTAGCATCTTTTGGAAGCTTCTTGTTGCACTCGTCGTCCTATTTGGTGTCATAATCGTTATCTTCTATCTCATTGTTCAACCCCGCTCCTTTAAGTTCTATGTCACGAAAGCTGAATTAACCCAATTTGATTACACCAACAACACACTACACTACAACATGGTACTCAACTTCACTGCCCACAACCCAAACAAAAAACTTGGCATCTATTATGACAATGTGGAGGCTCGAACATTCTATGAAGGGTCAAGATTCGCAAATGTTGATATGATCACATACAAGAATTCATTCCGCCAAGACAAGAAGAAAAGTGATCCCATGAGTGGCGTTTTCTCAGGACAACGAATATTGATGCTCGACAATGATCAAGTCTATGAGTTCAATAAGGACAAGAATGTTGGAGTTTATGATATCCATATAAAACTCTATTTCATAATTAGGTTTAAACTCGGAGACTCGATATCTCACAAGTACAAGCCCAAAGTCAAATGTGACCTCAAAACAGCATTGAGATCTAGTAATAATGCAACTTTTACCTTCACTCGGATTTTGCCTACTAAGTGCGATGTTCTATTCTAG 654 0.3914 MADKYSQLNGVRTGYHRDRSCCCCLISIFWKLLVALVVLFGVIIVIFYLIVQPRSFKFYVTKAELTQFDYTNNTLHYNMVLNFTAHNPNKKLGIYYDNVEARTFYEGSRFANVDMITYKNSFRQDKKKSDPMSGVFSGQRILMLDNDQVYEFNKDKNVGVYDIHIKLYFIIRFKLGDSISHKYKPKVKCDLKTALRSSNNATFTFTRILPTKCDVLF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04089 217 Pfam Late embryogenesis abundant protein 83 189 IPR004864 -
Tsu07g04089 217 PANTHER OS05G0367900 PROTEIN 12 215 IPR044839 GO:0098542
Tsu07g04089 217 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 12 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04089 Tsu-Chr7 46732000 46732653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04089 50 209 SNARE and Associated Proteins AT1G32270 32.716 9.42e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04089 - - gmx:100795302 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04089 07 46732000 46732653 Tsu01g02122 01 22117275 22120080 PCT