Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04088 ATGGATTTGGATCATGTAATTGCTGGAAAGTTTAATCTAGGAAGGAAAATCGGAAGTGGGTCTTGTGGGAAGATTTATATAGCTGTTAATGAACAAACTGGGGAGGAAGTTGCTGTCAAGCTGGAACCTGTGAACACCAAGCATCCACAACTTCACTATGAATCAAAATTGTATAGGCTTCTTCAAGGAGGAAAGGGGGTGCCTCACCTCAAGTGGTTTGGAGTTGAGGGAAACTACAATGTCATGGCAATTGACCTTCTTGGACCTAGTTTGGAAGATCGGTTCAATTATTGCAACCGGAAGTTAACATTGAAGACGGTGTTAATGCTTGCTGATCAATTAatTAACAGAGTTGAATATATGCATTCAAAAGGTTTCCTTCACCGTGACATAAAACCAGACAATTTTTTAATGGGCCGAGGACGTAAAGAAAACCAGGTGTACATTATTGACTATGGCCTCTCCAAGAAATTCAAAGATCTTCATACTCATAGGCACATACCATACCGTTGTGAAAAGCTTTCTTTCTTGCGCAGGGAAAACAAGAACCTTATAGGGACAATTCGGTATTCGAGTTTCAACACTCATCTCGGAATAGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTCATGTTCTTATGTATTTCTTAAGAGGAAGcCTTCCTTGGCAGGGACTGAAGGGGGAcaccaaacaacaaaaatttgataaaatcgccaagaagaagatggaaactTCCATTGAAGTTCTCTGCGAATCATATCCCTCGGAGTTTGCATCATACTTTCATTACTGCCGATCATTGCGGTTTGAAGACAAGCCCGATTATTCACATTTGAAAAGGCTTTTTAAAGCGCTATTTATTCGAGAAGGTTATGTATTTGACTATGTTTTTGACTGGACTTTATTGAGGCGTGACAGTAGCAAGGCGGCTAATGCAGGGCCATCTGGCCGGCTGACCTCATCTCTTCCATCTACCGCATAG 987 0.3951 MDLDHVIAGKFNLGRKIGSGSCGKIYIAVNEQTGEEVAVKLEPVNTKHPQLHYESKLYRLLQGGKGVPHLKWFGVEGNYNVMAIDLLGPSLEDRFNYCNRKLTLKTVLMLADQLINRVEYMHSKGFLHRDIKPDNFLMGRGRKENQVYIIDYGLSKKFKDLHTHRHIPYRCEKLSFLRRENKNLIGTIRYSSFNTHLGIEQSRRDDLESLGHVLMYFLRGSLPWQGLKGDTKQQKFDKIAKKKMETSIEVLCESYPSEFASYFHYCRSLRFEDKPDYSHLKRLFKALFIREGYVFDYVFDWTLLRRDSSKAANAGPSGRLTSSLPSTA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04088 328 SUPERFAMILY Protein kinase-like (PK-like) 6 301 IPR011009 -
Tsu07g04088 328 Pfam Protein kinase domain 12 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04088 328 PANTHER CASEIN KINASE-RELATED 3 312 - -
Tsu07g04088 328 SMART serkin_6 11 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04088 328 PANTHER CASEIN KINASE I-LIKE PROTEIN 3 312 - -
Tsu07g04088 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Tsu07g04088 328 Gene3D Transferase(Phosphotransferase) domain 1 2 322 - -
Tsu07g04088 328 ProSiteProfiles Protein kinase domain profile. 11 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04088 Tsu-Chr7 46727658 46730177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04088 8 224 EF-hand Containing Proteins AT3G50530 27.160 2.32e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tsu07g04088 Pkinase 6.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04088 K08960 - cam:101493293 529.635