Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04086 ATGCAACCTCGTTTGAACGACACATACTACGGGCCTAGCATTCCATTGGTGCCACGGCAACCCAACCGCTGTTGCCACCACCGTGGTAGAAGTTGTTGTAGCCATCTCTTCGGCATCTTCTGGAAGCTTCTAATTGCACTTATTGTTCTCTTTGGTCTCATAATCCTTATATTCTATATTATTGGTCAACCTCATGTCTTTAAGTTCTATGTCACGGAAGCTAAGCTAACCCAATTTGACTATATCAACAATACACTACATTACAACATGGTGCTCAACTTTATTATCCATAACTCAAACAAAAAGCTCAGCATCTATTATGGCAAAGTGGAGGCTCGAGCATTGTATGAAGGGTCAAGGTTTGCAAATGTTGATGTGGTCACACACATGAACTCATTCCGCCAATATAAGAGTAGTAGTGATCCCATGAGTGCTGTTTTCTTAGGACAACGACTAATGAAGCTCAACAATGAACAAATATCTAAATTCAACAAAGACAAGAGTCTCGGGGTTTATGATATCGGCAAGAGTCATGGAATTTATGATATCCATGTGAAACTTTACTTTAAAATTAGGTTCAGACACGGAGATACAATTTCTCGCAAGTATAAACCCAAGGTGAAATGTGACCTCAAAGTTCCATTAAGCTCTAGTAATAATGAAACATTTACGTTCAGTAATTGGGTTTTGCCCAACAAGTGCAAAGTTGTGTTCTAG 717 0.3933 MQPRLNDTYYGPSIPLVPRQPNRCCHHRGRSCCSHLFGIFWKLLIALIVLFGLIILIFYIIGQPHVFKFYVTEAKLTQFDYINNTLHYNMVLNFIIHNSNKKLSIYYGKVEARALYEGSRFANVDVVTHMNSFRQYKSSSDPMSAVFLGQRLMKLNNEQISKFNKDKSLGVYDIGKSHGIYDIHVKLYFKIRFRHGDTISRKYKPKVKCDLKVPLSSSNNETFTFSNWVLPNKCKVVF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04086 238 PANTHER OS05G0367900 PROTEIN 176 235 IPR044839 GO:0098542
Tsu07g04086 238 PANTHER OS05G0367900 PROTEIN 19 174 IPR044839 GO:0098542
Tsu07g04086 238 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 176 235 - -
Tsu07g04086 238 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 19 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04086 Tsu-Chr7 46723476 46724192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04086 68 222 SNARE and Associated Proteins AT1G32270 35.220 1.66e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04086 - - gmx:100807701 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04086 07 46723476 46724192 Tsu01g02126 01 22190565 22191437 PCT