Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04085 ATGCACCCCCAATTGAACGATTCATACTATGGGCCGGCTATTCCACAGGCGGGAGGACAATCCCGTAGTCGCCAACACCGAGGTGGAAGTGGTTGTGGTTGTCTCTTTAGCATCTTATGGAAGCTTCTAGTTGCACTCGTCGTCCTTTTTGGTCTTATAGTTCTAATCTTCTATCTTATCGTTCAACCTCGTCCCTTCAAGTTTTATGTAGCAAAAGCCGaactaactcaatttgattatgtcAACAACACACTACACTACAACATGGTGCTCAACTTCACAGCTcacaatccaaataaaaaactcAGTATCAATTACGATAAAGTTGAAGCACAAGCATTATATGAAGGGTCAAGGTTTGCTAATGTAGATGTGATCACACACATGAACTCATTTCGCCAAAATAAGAAAAGTAGTGACCCCATGAGTGGTGTTTTCTTAGGACAGAAATTGTTGATGCTTGACAATGATCAAGTCTCTAAGTTTAACAAAGATAAGAATATCAGAGTTTATGATATCTATGTGAAACTCTACTTCAGGATTAGGTTCAAACTCGGAGACTCAATAACTCGTACGTATAAACCTAAGGTTAAATGTGACCTCACCGTTCCTTTGAGAACTAGCTATGAAACTAACTTTACCTTCATTCGACTTATACCAACCAAGTGCAGTGTTGAGTTCTAG 684 0.3772 MHPQLNDSYYGPAIPQAGGQSRSRQHRGGSGCGCLFSILWKLLVALVVLFGLIVLIFYLIVQPRPFKFYVAKAELTQFDYVNNTLHYNMVLNFTAHNPNKKLSINYDKVEAQALYEGSRFANVDVITHMNSFRQNKKSSDPMSGVFLGQKLLMLDNDQVSKFNKDKNIRVYDIYVKLYFRIRFKLGDSITRTYKPKVKCDLTVPLRTSYETNFTFIRLIPTKCSVEF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04085 227 PANTHER OS05G0367900 PROTEIN 20 225 IPR044839 GO:0098542
Tsu07g04085 227 Pfam Late embryogenesis abundant protein 93 199 IPR004864 -
Tsu07g04085 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 20 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04085 Tsu-Chr7 46719887 46720570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04085 60 205 SNARE and Associated Proteins AT1G32270 34.694 4.54e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04085 - - gmx:100807701 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04085 07 46719887 46720570 Tsu01g02128 01 22218546 22219253 PCT