Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04084 ATGGCTGATAATCGGCAACCACCATTAAACGGCGCCTACTATGGCCCCGCGATTCCACCACCAGCACAACCCCGATACAGCCATCACCGAAGTAGAAGCTGTTGTTCATGTCTCTTCGGTTTCCTTTGGAAGCTCCTAGTTGCACTCATTGTTCTTGCTGGCCTCGCAGTTCTTATTTTTTATCTCATTGTTCAACCACGCTCCTTCAAATTCAATGTCACGGAAGCCAACCTAACTAAGTTTGACTACACAAACAACACATTACACTATAACATGGTGCTCAACTTCACTGCCCGGAACCCAAACAAAAAGCTTAGCATCTATTACGACAATGTTGAGGCTCGAGCATTCTACGAAGGGGAAAGGTTTGCAAATGTCGATGTGAACGCATCCTTTCGCCAATACAAGAAAAGTAGTAACCCCATGAGCGGTGTTTTCTCAGGACAACAGTTGTTAATGCTAGACAATGATCAAGTCTCTGAGTTCAACAAAGATAAGAATATTGGAGTTTATGATATTTATGTGAAGTTATACTTCAGGATTAGATTTAGACTCGGGGATGTGATATCGGGTACTTACAAGCCCAAGGTGAAATGTCACCTCAAAGTCCCATTGACTTCGAACAATACCACTGCAACCTTCACTCGATTTGTGCCTACCAAGTGTGATGTTGATTTCTACTAA 684 0.4298 MADNRQPPLNGAYYGPAIPPPAQPRYSHHRSRSCCSCLFGFLWKLLVALIVLAGLAVLIFYLIVQPRSFKFNVTEANLTKFDYTNNTLHYNMVLNFTARNPNKKLSIYYDNVEARAFYEGERFANVDVNASFRQYKKSSNPMSGVFSGQQLLMLDNDQVSEFNKDKNIGVYDIYVKLYFRIRFRLGDVISGTYKPKVKCHLKVPLTSNNTTATFTRFVPTKCDVDFY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04084 227 Pfam Late embryogenesis abundant protein 96 199 IPR004864 -
Tsu07g04084 227 PANTHER OS05G0367900 PROTEIN 21 224 IPR044839 GO:0098542
Tsu07g04084 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 21 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04084 Tsu-Chr7 46716813 46717671 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04084 63 218 SNARE and Associated Proteins AT1G32270 33.962 9.86e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04084 - - gmx:100807701 319.316