LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu07g04082	ATGGATCATTTCCCATTCATACATACCTCACACTTACACTTACTATTCTATTCTCTATATATACACATAACTTTTCTCACATTTTTTCATATCACAAAACATAGGAGGAACATTTTATTACAAACTCCtccatatattaatttatttctctcgtaccttttaattaatttcattccACTTTGCTTTATAGCCATGCATGAGAAACAACAATTAAACGGAGCCTACTATGGTCCATCAATCCCCCCACCAAAATCCTACCACCGTCCATCACGCGGCGGCGGTTTCGACTGCTGCTGTGGCTGTCTCTTCAACCTCATCTTCAAACTAATCCTCACCGTTATAATAATCGTTGGCATCATCGTCTTCCTCTTCTGGCTCATAGTACGTCCCAACGTTGTCAAAGTTCATGTCACAGAAGCAACTCTCACACAATTCAACTACACAAACAGCAACAGCAACCTTAACTATGATCTCTCTTTAAACATCACAATTCGTAACCCAAATAAAAAACTAGGAATTTACTACGATAACATCGAAGCTAGAGTATTATACCATGATGTTAGAGTTGACTCTGTTATTCTTGACCCTTTTTATCAAGGACATAAAAGTACTAACTTGTTGAATCCTTCATTTAAGGGTCAGAAAGTGATTGTTCTTGGTGCTGATCAGAGTTTGGATTTGAGTAAAGAGAAGGATGCAGGTGTTTATGAGATTGTTGTGAAGATGTATCTTAGAGTGAGGTTTAAATTCGGTGTGATTAAGACAAGGAAGATGAAGCCAAAGATTACATGTGAGTTGCGTATTCCTTTGAAATCTGCCGGAGGATCATCGGCCGGTGGTGGTTTTGAAGCCACCAAATGTGATTGGGATCGTTGA	876	0.371	MDHFPFIHTSHLHLLFYSLYIHITFLTFFHITKHRRNILLQTPPYINLFLSYLLINFIPLCFIAMHEKQQLNGAYYGPSIPPPKSYHRPSRGGGFDCCCGCLFNLIFKLILTVIIIVGIIVFLFWLIVRPNVVKVHVTEATLTQFNYTNSNSNLNYDLSLNITIRNPNKKLGIYYDNIEARVLYHDVRVDSVILDPFYQGHKSTNLLNPSFKGQKVIVLGADQSLDLSKEKDAGVYEIVVKMYLRVRFKFGVIKTRKMKPKITCELRIPLKSAGGSSAGGGFEATKCDWDR	291

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu07g04082	291	Pfam	Late embryogenesis abundant protein	161	264	IPR004864	-
	Tsu07g04082	291	PANTHER	OS05G0367900 PROTEIN	89	289	IPR044839	GO:0098542
	Tsu07g04082	291	PANTHER	LATE EMBRYOGENESIS ABUNDANT PROTEIN	89	289	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu07g04082	Tsu-Chr7	46706754	46707889	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu07g04082	127	280	SNARE and Associated Proteins	AT1G32270	40.260	1.70e-27	107

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu07g04082	-		-	gmx:100793187	301.982