Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04073 ATGTCTAGCTCCAGAAAGAAGCTTCTTCTGAACACTGTGTCGGTGAAACTAGGCTGTGGAAGTTGCAGAAAGCTAAAGCTAAGTAACATATTCaacccaaaaccaaaacccaagAACCCCACTTACCAAAAACACAAACTTTACAATAACCAGTACTCCTCTTCTTCAGGTCCTTGGAGTACTACTGAAGACAAATATGACAGTACAAGCACCCCAAATACCACCACTACTACCAACACTGCCACCACATTTTCACCTTTGTATCAATCAAACTTTTCTGATTCAGAGACCTATGCAAAGGACCAGAGAAGGGTAGGAGGTTTAGGCAGAGCTGGAGGAGAAGGTGTTGCTGTGGAGAAAGATTCTGAAGATCCTTATCTTGATTTCAGACATTCCATGCTTCAAATGATATTGGAGAATGAAATATACTCAAAAGAAGATCTTAGAGAGCTTCTGAATTGCTTTCTTCAGCTGAATGAACCGTATCACCATGGTGTTATAGTCAGAGCTTTTACTGAGATTTGGAATGGTGTCTCTTTGAGGTCTAGTTCATCCAGGGTTCATACAACTCGGACCCGGAAGCCACGCAGACATTAA 597 0.402 MSSSRKKLLLNTVSVKLGCGSCRKLKLSNIFNPKPKPKNPTYQKHKLYNNQYSSSSGPWSTTEDKYDSTSTPNTTTTTNTATTFSPLYQSNFSDSETYAKDQRRVGGLGRAGGEGVAVEKDSEDPYLDFRHSMLQMILENEIYSKEDLRELLNCFLQLNEPYHHGVIVRAFTEIWNGVSLRSSSSRVHTTRTRKPRRH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04073 198 MobiDBLite consensus disorder prediction 43 79 - -
Tsu07g04073 198 MobiDBLite consensus disorder prediction 30 79 - -
Tsu07g04073 198 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 183 IPR038933 GO:0045892
Tsu07g04073 198 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 116 176 IPR006458 -
Tsu07g04073 198 Pfam Transcriptional repressor, ovate 122 177 IPR006458 -
Tsu07g04073 198 ProSiteProfiles OVATE domain profile. 118 177 IPR006458 -
Tsu07g04073 198 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04073 Tsu-Chr7 46665112 46666139 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu07g04073 Ovate 1.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04073 - - mtr:MTR_7g105790 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04073 07 46665112 46666139 Tsu07g04073 07 46665112 46666139 ECH