Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04072 atgaacaaaaaaacattgagcctttcttctcttctcaaAAACACAGAACACAAATATTCATCTTCATGGCCATGGCCATATTGTCACCAACCAAAAACACTCTCTTTCAGAGCTGAAAACATCAATAACAAAGATGATacattcaaaatcatcaactcAGCTTATTTGGATACTTCTGAAGAATCCTTAACTGTTTCTCAAAATTCTGATTCAACCTTTTCAAAACCTTCTTTTGATGAATCTAAACAAAATGATTCGGTCGAAACTGTGATTCGAGGATTATCTTCTGATCGATTTTTCTTCGAGCCAGATGAGACTAAATCTATTTTAGAAGCTAATAATAAAGTTGTAGCAGCAGAAAGTGAAACTGCTCAAAACTTGCCATTCAAAGATAGTGTTGTGTTATCTATGGAATCTCGAGATCCTTATGTCGATTTTCGAAAATCTATGGAGGAAATGGTAGAAACTCATGATGTTAAAGATTGGGAAAGTCTTCAAGAGCTTTTGTGTTGGTATTTGAAGGTTAATGAGAAAAACAATCATGGTTATATTGTTGGTGCTTTTGTTGATTTATTGGTTGGTCTTGCATTTGCTTCGTCTTCATCATCGTTTTCATCCTCATCTTCTTCGTCTTCTCGTTCTCCTTCTTCTCCTTTATCGTTTTATAGTTCTTCTTTGTCTTCGTCTTATAGCACTCGATGTGTTTCTTGTTTGGAAGCTCGCGGTGAAGAGGTTGATACTCCAAGTTCTTCTTTGTTGTTGGAACAAGTTAGGGAGGAAGAAGAGGTTGATACTCCGAGTTCTTCTTTGTTGTTAGAACAAGTTAGGGAAGAGATTGATCACGAAAATGAAGTTGAAGCTTCAAAATCCGAAACTTCAATTTCATCTTCGTCATCAAGTACTTAA 906 0.3355 MNKKTLSLSSLLKNTEHKYSSSWPWPYCHQPKTLSFRAENINNKDDTFKIINSAYLDTSEESLTVSQNSDSTFSKPSFDESKQNDSVETVIRGLSSDRFFFEPDETKSILEANNKVVAAESETAQNLPFKDSVVLSMESRDPYVDFRKSMEEMVETHDVKDWESLQELLCWYLKVNEKNNHGYIVGAFVDLLVGLAFASSSSSFSSSSSSSSRSPSSPLSFYSSSLSSSYSTRCVSCLEARGEEVDTPSSSLLLEQVREEEEVDTPSSSLLLEQVREEIDHENEVEASKSETSISSSSSST 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04072 301 MobiDBLite consensus disorder prediction 274 288 - -
Tsu07g04072 301 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 133 196 IPR006458 -
Tsu07g04072 301 MobiDBLite consensus disorder prediction 243 301 - -
Tsu07g04072 301 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 8 237 - -
Tsu07g04072 301 ProSiteProfiles OVATE domain profile. 135 194 IPR006458 -
Tsu07g04072 301 Pfam Transcriptional repressor, ovate 139 195 IPR006458 -
Tsu07g04072 301 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 8 237 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04072 Tsu-Chr7 46653117 46654224 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu07g04072 Ovate 2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04072 - - gmx:100784899 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04072 07 46653117 46654224 Tsu01g04931 01 56232932 56233743 ECH
Tsu07g04072 07 46653117 46654224 Tsu07g04072 07 46653117 46654224 ECH