Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04046 atggaaaatatgcCACCGGGTTATCGTTTCTACCCTACAGAAGAAGAGCTTATTTCGTTCTATCTTCACAAAATGCTTGAAGGAGAtcagaaaaaatatttgattagtACGGTTATACCGGTTGTTAATATATACGATTATAATCCATCACAACTCCCACAAATTTCAGGAGAGGCTAGTATGAGTGACAAAGAGCAATGGTTCTTTTTCATTCCAAGGCAAGAAAGTGAAGTGAGAGGAGGAAGACCAAGACGTCTCACGACAACCGGGTACTGGAAAGCCACCGGATCTCCTAATCATGTTTATTCGTCCGATAATCGCATCATTGGCATGAAAAGAACTATGGTTTTCTATTGTGGAAGAGCTCCAAATGGAAAGAAAACCGATTGGAAAATGAATGAGTATAAGGCCATTCAATTAGATCATGAAGCATCCTCTTTAAATAGATTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAGAAATCAAAGTGCTTGAGAGCATTTGATAGAAGACCAGCACCAAGGAGGGTTACACCACTTGTTCAAAATGCTCAACAGCACCAAAAGGACTCAATATGCGATCATGATGTTCAAATGTTGATGGGGATAAGTGCAACAAGTTCACCAGAGACTTCTTCCTCTATAGATAACCATCATGGCCAACCCTCACAAGAAGTAGGAGAGGCTAGCCAAATGGATATTAATGTTAACTACGAGCCTTTGTTGGATTGGGAGAGTGTGAATTGGTTCTTGGAATCAGAGCTATGA 771 0.3891 MENMPPGYRFYPTEEELISFYLHKMLEGDQKKYLISTVIPVVNIYDYNPSQLPQISGEASMSDKEQWFFFIPRQESEVRGGRPRRLTTTGYWKATGSPNHVYSSDNRIIGMKRTMVFYCGRAPNGKKTDWKMNEYKAIQLDHEASSLNRLRQEFSLCRVYKKSKCLRAFDRRPAPRRVTPLVQNAQQHQKDSICDHDVQMLMGISATSSPETSSSIDNHHGQPSQEVGEASQMDINVNYEPLLDWESVNWFLESEL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04046 256 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 251 - -
Tsu07g04046 256 MobiDBLite consensus disorder prediction 207 228 - -
Tsu07g04046 256 SUPERFAMILY NAC domain 2 162 IPR036093 GO:0003677|GO:0006355
Tsu07g04046 256 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 251 - -
Tsu07g04046 256 Gene3D NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Tsu07g04046 256 Pfam No apical meristem (NAM) protein 5 136 IPR003441 GO:0003677|GO:0006355
Tsu07g04046 256 ProSiteProfiles NAC domain profile. 4 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04046 Tsu-Chr7 46461386 46463773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04046 7 250 NAC Transcription Factor Family AT5G22380 46.185 2.98e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu07g04046 NAM 6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04046 - - lang:109348309 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04046 07 46461386 46463773 Tsu07g04046 07 46461386 46463773 ECH