Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04008 ATGGCGGAAGAGCACCGATGTGAAACACCAGAAGGTCACAGACTTTGCGCTAACAACTGTGGATTCTTCGGTAGTTCAGCTACGATGAATCTCTGTTCAAAATGTTACAGAGATATTCATTTGAAGGAACAAGAACAAGCTAAAACCAAATCAACAATCGAAACTGCTCTATCATCAGCCTCCGCTTCAACCGCCGTGGTTGTTGCATCTCCGGTACCGGAAATCGAATCTCTCCCTCAACAACAGCCGGCGTTGACTGTACCGTCGATTGTTCCTGACGAATCGGATTCACCGATCGGATCGGTTCAACCGAACCGGTGTGGAACGTGTAGGAAACGGGTCGGGTTAACCGGATTCAAGTGTAGATGTGGAATTACGTTTTGTGGGACCCATAGGTATCCGGAGAAACACGAGTGTGGTTACGATTTCAAAGCGGTGGGAAGAGATGAGATAGCGAAAGCGAATCCTGTGATCAAAGCTGATAAGCTGAGAAGAATTTGA 501 0.4711 MAEEHRCETPEGHRLCANNCGFFGSSATMNLCSKCYRDIHLKEQEQAKTKSTIETALSSASASTAVVVASPVPEIESLPQQQPALTVPSIVPDESDSPIGSVQPNRCGTCRKRVGLTGFKCRCGITFCGTHRYPEKHECGYDFKAVGRDEIAKANPVIKADKLRRI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04008 166 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Tsu07g04008 166 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Tsu07g04008 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 62 - -
Tsu07g04008 166 SUPERFAMILY AN1-like Zinc finger 94 161 IPR035896 -
Tsu07g04008 166 SMART AN1_Zf_4 107 144 IPR000058 GO:0008270
Tsu07g04008 166 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Tsu07g04008 166 Pfam AN1-like Zinc finger 107 143 IPR000058 GO:0008270
Tsu07g04008 166 Gene3D - 86 162 IPR035896 -
Tsu07g04008 166 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 166 - -
Tsu07g04008 166 ProSiteProfiles Zinc finger AN1-type profile. 101 147 IPR000058 GO:0008270
Tsu07g04008 166 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 166 - -
Tsu07g04008 166 Gene3D - 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04008 Tsu-Chr7 46148652 46149963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04008 1 166 C2H2 Transcription Factor Family AT3G52800 51.977 6.36e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04008 - - gmx:100527251 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04008 07 46148652 46149963 Tsu07g04008 07 46148652 46149963 ECH
Tsu07g04008 07 46148652 46149963 Tsu01g02213 01 23204017 23212934 PCT