Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04002 ATGGAATCAGATAAACGCTATGATTCaacctcttcttctctttcccTATCTCctacttcatcatcttcttcatcctcttcctgTCCATCGGAAGATCGTCCGGTCAAGACCGAGGAGATTGAGGCGGCGGAGACTCTTGCTTACTTAGCGCGACTAGCAATGCGCCAAACAACTCACTCCGCCGATAAACGAGACAGCTTCCGATTCACAAGTGACGACTCACTCATTCCTCATTCGGATCCTCCTCCACATCTGCAGGGCCAAGTTGTTGCAGGTCAGCAGCTAGATGGAAAAATATCTAGTACTACATCCGTAGAAACAGAAAGGACTCAGGAGAGTGACTGCTTAAGAAACATGAAGGTGGAGCAGAATGCTGATTTACCTAATAAGACTACTCACTGCAATAAGTCAAGACGTAATTTAACCGAGGAAGAAAAAGAAGCACGGAGGATACGAAGGGTATTGGCAAATAGAGAGTCCGCTAGGCAGACAATTCGCCGCAGGCAGGCTCTGACTGAGGAGTTAAACAGAAAAGCTGCGACCTTAGCGTTAGAAAATGAAAACCTGAAGAGGaagaaggagTTGGCTTTGAAAGAGTATCAGTCTTTAGAGACTACAAATAAGCTCTTAAAAGCACAAGTAACTAAgtcaaaaaacacaaaagtgGAAAAAACTCCTGATGAGCAGGAGTTATCTGTGGCTGAGGTAGCACCTATGTCTGGTAATAGTCCATGGTTTCTTTATAACCATTTTCCGGTTAGACAGTTATTTTGGCCCGCCATTTTTCAGTCTTCTAAACAAAGTCAATTACAACATACACCATTTAATTCCATTGCCATTCCATCACATGTATATGTACCATGTCCTTCTGAGTCTGAATCTCCTCACAAGCAAAATAACCTTGTAAATGACAATCAAACACAAAATCCATCGTACATGTTTCCATGTCCTTGGTTATACCCTCCTCCAGAAATTGGAAATGGACAACCACCACCTTCCAGTGGCCTAGAAGATAAACAAGATAATCTTTCTCCAGATGAAAAATGCAGTACTAGTTTATCCTTAAGTAGAGTGGGAAATGGGGATTATCATGCAACTCTACCTATCAACCTGAAAACAGAAGCTTCTGACCGGACAGAATCCAGATCTAGTAATGACCCTGACCATGCCACTACAAGTTTTTCTTTGGATGGAGGTGAGCAGAAAACAAGATGTCACATAGAAATGTTCCATGGACCTGCAGTTGATTGTAATGGACATGCTTATGTAGTCAAGCAAGAACCTGAGCTTCAATTACATTCCGCTTCCGATACCAACATATCTTCAACAGTTTCTCATATCAAACCTTATTCACTGGAAAAGAAACAAGAACAGTTCATATCCCCAGGTAAAAATCTAGTGGATGCAGTTGCTGCAGCAGAGGCACGAAAGAGGAGAAAGGAGctgacaaaactaaaaagcaacCAAAGCCGCCAGTTCCGGATGGAGTGTTGA 1494 0.3989 MESDKRYDSTSSSLSLSPTSSSSSSSSCPSEDRPVKTEEIEAAETLAYLARLAMRQTTHSADKRDSFRFTSDDSLIPHSDPPPHLQGQVVAGQQLDGKISSTTSVETERTQESDCLRNMKVEQNADLPNKTTHCNKSRRNLTEEEKEARRIRRVLANRESARQTIRRRQALTEELNRKAATLALENENLKRKKELALKEYQSLETTNKLLKAQVTKSKNTKVEKTPDEQELSVAEVAPMSGNSPWFLYNHFPVRQLFWPAIFQSSKQSQLQHTPFNSIAIPSHVYVPCPSESESPHKQNNLVNDNQTQNPSYMFPCPWLYPPPEIGNGQPPPSSGLEDKQDNLSPDEKCSTSLSLSRVGNGDYHATLPINLKTEASDRTESRSSNDPDHATTSFSLDGGEQKTRCHIEMFHGPAVDCNGHAYVVKQEPELQLHSASDTNISSTVSHIKPYSLEKKQEQFISPGKNLVDAVAAAEARKRRKELTKLKSNQSRQFRMEC 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04002 497 MobiDBLite consensus disorder prediction 1 40 - -
Tsu07g04002 497 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Tsu07g04002 497 SMART brlzneu 145 209 IPR004827 GO:0003700|GO:0006355
Tsu07g04002 497 Coils Coil 172 213 - -
Tsu07g04002 497 Coils Coil 472 492 - -
Tsu07g04002 497 Coils Coil 134 154 - -
Tsu07g04002 497 MobiDBLite consensus disorder prediction 57 71 - -
Tsu07g04002 497 CDD bZIP_plant_GBF1 150 201 IPR045314 GO:0003700|GO:0006355
Tsu07g04002 497 MobiDBLite consensus disorder prediction 320 356 - -
Tsu07g04002 497 PANTHER G-BOX-BINDING FACTOR 3-RELATED 9 491 IPR044827 GO:0003700|GO:0006355|GO:0043565
Tsu07g04002 497 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 147 210 IPR004827 GO:0003700|GO:0006355
Tsu07g04002 497 MobiDBLite consensus disorder prediction 8 31 - -
Tsu07g04002 497 MobiDBLite consensus disorder prediction 371 397 - -
Tsu07g04002 497 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 9 491 - -
Tsu07g04002 497 MobiDBLite consensus disorder prediction 56 86 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04002 129 497 bZIP Transcription Factor Family AT1G19490 34.293 7.98e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04002 - - mtr:MTR_7g104190 711.064