Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03987 ATGGCTCAAAAGTACTTACATGAGCTACTAAAAGAAGATCAAGAACCATTTTTTCTTAACAACTACATTTCAGATAAACGTAACCAAATGAAAATCACTACTACTTTACAACTCAACAAAAAACCTATAAACTCAAAATTCAACATAAATCTATGTAAAAACACTTCTTGTTTTTTCTCATTTCCTCAAACACCAGACTTTAAAAAATCACCACTTTTTGAACTAACTTCACCTGTTAAAAGTCCTTGCAAAATCCCTTCTAGAACTGCTACTCTTCTTCTTGAAGCTGCTCTTAGGATCCACAAacattcatcatcttcttcttcaaattacaaaactaaaaacaaaggTTTTGGGCTATTTGGGTCTTTATTCAAGAAACTCAAGCAGAGAAACCAGAATCGGAAGCTTGAATTAGAGACTGAAAATGTGTCTGTGAAGGATATATTGAAGTGGGATTCTTCTGTGAAGTGTAGAGAAAAAGTGGTTTTTCataaagaaaatgaagataaaTCATTGGAAATGGAAATGGAAACTTCTTGTAGTGGTTACTCTGAAGGGATTATTCATGAAGATTGTGCTTATTATCACTGTGCTTTTTCTGAAAGCCCTTTTCATTTTGTTCTTCAAACTAGTCCTTGCTCCGGTAGCCACACGCCGGAGTTAGCCTCGCCGAGTCGTCACATAACAGAGGACAAAGAAAGCAATGGAGGTGAGATTCTCAATCAATTCAAGTCAggtgaagaagaggaagaagataaGGAACAGTGTAGTCCAGTCTGTGTTTTAGACCCACCATTCAATGACGATGACGAAGGACATATAaacgatgaagatgatgaagaagatgatgattttgatttggagAGTAGTTATGCCATTGTTCAGAGAGCAAGGCAGCAGATATTGTACAAGCTTAGTCGATTTGAGAAACTCGCGGAGTTGGATCCATTAGAACTTGAGAAAAGAATGCTGGAGGAAGAAGAGGACGAGGACGAGGATGAAACATATATGGAAGaggatgatgatgttgaagatgagGAAATGGATGATGCTGTATCATGTGAACAAAATGATTTCAAACAATTGGTTTTTGAAGCTGTCTATCTGTCAATGGTCCATGACAGACAAAAAATTCCACAAGAGTTTAAGAAACTGATTTCTGATCTTATTTtggaagaagagagagaatttAATTCTTTAGAAGAGAGAGACATAGTGATAACTAAGATATGCAAGAGGCTAGAATCATGGAAAGAAGTGGAATCAAACACAATTGATATGATGATAGAAGAGGATTTTTCTGTAGAGGATGAAGGGTGGAAGAAAAATGTTGAACAGATAAGGAATATGGCCGGTGAGCTTGAATTTGCTATCTTTAGCATTTTGGTGGAGGAATTTTCAGAGGAATTAGTATGTTAA 1422 0.3235 MAQKYLHELLKEDQEPFFLNNYISDKRNQMKITTTLQLNKKPINSKFNINLCKNTSCFFSFPQTPDFKKSPLFELTSPVKSPCKIPSRTATLLLEAALRIHKHSSSSSSNYKTKNKGFGLFGSLFKKLKQRNQNRKLELETENVSVKDILKWDSSVKCREKVVFHKENEDKSLEMEMETSCSGYSEGIIHEDCAYYHCAFSESPFHFVLQTSPCSGSHTPELASPSRHITEDKESNGGEILNQFKSGEEEEEDKEQCSPVCVLDPPFNDDDEGHINDEDDEEDDDFDLESSYAIVQRARQQILYKLSRFEKLAELDPLELEKRMLEEEEDEDEDETYMEEDDDVEDEEMDDAVSCEQNDFKQLVFEAVYLSMVHDRQKIPQEFKKLISDLILEEEREFNSLEERDIVITKICKRLESWKEVESNTIDMMIEEDFSVEDEGWKKNVEQIRNMAGELEFAIFSILVEEFSEELVC 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03987 473 MobiDBLite consensus disorder prediction 271 286 - -
Tsu07g03987 473 MobiDBLite consensus disorder prediction 216 286 - -
Tsu07g03987 473 PANTHER OS04G0572500 PROTEIN 1 473 - -
Tsu07g03987 473 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 473 - -
Tsu07g03987 473 Coils Coil 315 335 - -
Tsu07g03987 473 MobiDBLite consensus disorder prediction 244 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03987 Tsu-Chr7 45930592 45934245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03987 3 472 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 34.930 1.29e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03987 - - cam:101499859 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03987 07 45930592 45934245 Tsu07g03987 07 45930592 45934245 ECH
Tsu07g03987 07 45930592 45934245 Tsu01g02246 01 23709800 23715510 PCT