Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03966 ATGAACACAAAAACACTAGCATTACCCTTAACCTTAGTATTTCTCTCCACATTACTACTATCTTTAACACAAAGTGTACAACAAAATGATACACAAGCCCTCACCGAATTCCGTCTCCAAACAGACTTCCACGGCTACCTCGTCAGTAATTGGACTGGCGAGGATGCCTGCAATGCTGCATGGCGCGGCGTTGAATGCTCCCCGAACGGTAGAGTTATAGCTCTCTCCGTCCCTTCTCTCAATCTCCGAGGTCCTGTTGATTCTCTCTCGACGCTAATCTACTTACGCTTCCTTGACCTACACGATAACCGTTTAAATGGTACCATTGTTCCTCTTTTAAACTGCACTGATCTTGAACTTCTCTATCTCTCACGCAACGACTTCTCCGGTGAAATACCGCCGGAGATATCATCGTTACGGTTTCTTATCAGACTCGACATCTCCGATAACAACATTCACGGTAAAATACCtaaagaaatttcaaaattgaatCATCTCCTCACTCTCCGGTTACAGAACAACGAACTCTCCGGCGAAGTTCCcgatctttcttcttcacttaaCAATCTCAGAGAACTCAACATCACAAACAATGAACTCCAAGGACACTTACCAGACGCAATGTTTACTAAATTCGGCAACAAAAGCTTCTCCGGTAACGACGGTCTTTGCGGATCGAGTCCGTTACCGAATTGTTCCGTCACCGGAACTCCTCATCCTCCTTCCGATGATGCTGATTCCGAAATTGTTCCTTCAAACCCTAGCTCAATCCCAAAATCTAGCAACAGTACTCACGGTATAATTCCATCTGAAAATCCTAGAAAACGGAAAATGTTGAGTCCGGGAGGAATTGTGGCGGTTGCGGTGGCGGGTTCGGTGGTTTTACTGATGTTGGTTTCTTTCACGGTGGCGCAATGTTGCGGAAGAGGAAGATCTAATTCAACGGTTGGGATGGATAGTGAAATTGGGAAGAGAAAAAGTGATAGTAGTAGTGGAAGTGAGAAAAAAGGGTACCGTGGAAATAGTAATAATGGGGGTGTAGATAGAGATAGTGATGGAACAATAACTGAAACAGAGAGAAGTAAATTAGTGTTTTTTGATAGGAGGAATGAGTTTGAGTTGGAGGATTTGTTAAGAGCTTCAGCTGAAATGCTTGGGAAGGGTAGTTTGGGAACTGTTTATAGGGCTATTCTTGATGATGGATGTACTGTTGCTGTTAAGAGACTTAAGGATGCTAACCCTTGTGATAGGAACCAGTTTGAACAGTATATGGATGTTGTGGGGAAGCTTAGACACCCTAATGTTGCTAGACTTAAAGCTTATTATTATGCTAAGGAAGAGAAGCTTCTTGTTTATGATTATCTCTCTAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGTGGTCCGGGAAGGATTCCATTGGATTGGACGACAAGAATAAGCTTGGTGTTAGGGGCAGCAAGAGGTCTAGCAAGGATTCATGGAGAGTATAGTGCAGCCAAGATACCTCATGGGAATGTGAAATCTTCCAATGTGCTACTTGACAAGAATGGGGTTGCTTGCATAGGTGATTTTGGTTTGTCGCTATTGTTGAACCCTGCTCACGCTGTTGCGAGGTTGGGTGGGTACAGAGCTCCAGAACAGGCGGAAGCGAAGAAACTCTCACAAGAGGCAGATGTGTATGCTTTTGGGGTGTTGATATTGGAAGTTTTGACAGGAAGAGCTCCTTCCTCCTCTCAGTATTCTTCTCCGGTAGGAGTTCGCCCTCGTGTGGAATTCGAGGAACAAGTAGCTGATCTTCCAAAATGGGTTCGGTCTATTGTGAAGGAAGAGTGGACATCAGAGGTGTTTGATCAAGAACTTTTGAGGTACAAGAACATTGAGGAGGAGCTTGTTTCAATGTTGAATGTGGGATTGGCCTGTGTTGTGTCACAACCTGAGAAAAGGCCAACTATGTTGCAAGTTGTTAAGATGATTGAAGATATTAGGGTTGAACAATCTCCTCTAAGAGAGGATTATGATGAATCACGCAATTCACTTTCACCTTCACTTGCAACTACTGAAGATTGCCTAGCTTAA 2082 0.4323 MNTKTLALPLTLVFLSTLLLSLTQSVQQNDTQALTEFRLQTDFHGYLVSNWTGEDACNAAWRGVECSPNGRVIALSVPSLNLRGPVDSLSTLIYLRFLDLHDNRLNGTIVPLLNCTDLELLYLSRNDFSGEIPPEISSLRFLIRLDISDNNIHGKIPKEISKLNHLLTLRLQNNELSGEVPDLSSSLNNLRELNITNNELQGHLPDAMFTKFGNKSFSGNDGLCGSSPLPNCSVTGTPHPPSDDADSEIVPSNPSSIPKSSNSTHGIIPSENPRKRKMLSPGGIVAVAVAGSVVLLMLVSFTVAQCCGRGRSNSTVGMDSEIGKRKSDSSSGSEKKGYRGNSNNGGVDRDSDGTITETERSKLVFFDRRNEFELEDLLRASAEMLGKGSLGTVYRAILDDGCTVAVKRLKDANPCDRNQFEQYMDVVGKLRHPNVARLKAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHGEYSAAKIPHGNVKSSNVLLDKNGVACIGDFGLSLLLNPAHAVARLGGYRAPEQAEAKKLSQEADVYAFGVLILEVLTGRAPSSSQYSSPVGVRPRVEFEEQVADLPKWVRSIVKEEWTSEVFDQELLRYKNIEEELVSMLNVGLACVVSQPEKRPTMLQVVKMIEDIRVEQSPLREDYDESRNSLSPSLATTEDCLA 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03966 693 ProSiteProfiles Protein kinase domain profile. 379 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03966 693 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Tsu07g03966 693 MobiDBLite consensus disorder prediction 314 353 - -
Tsu07g03966 693 SUPERFAMILY L domain-like 28 209 - -
Tsu07g03966 693 Pfam Protein kinase domain 383 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03966 693 PANTHER LRR RECEPTOR-LIKE KINASE 5 684 - -
Tsu07g03966 693 MobiDBLite consensus disorder prediction 671 693 - -
Tsu07g03966 693 MobiDBLite consensus disorder prediction 334 351 - -
Tsu07g03966 693 SUPERFAMILY Protein kinase-like (PK-like) 383 660 IPR011009 -
Tsu07g03966 693 Gene3D Ribonuclease Inhibitor 112 234 IPR032675 -
Tsu07g03966 693 Gene3D Ribonuclease Inhibitor 27 111 IPR032675 -
Tsu07g03966 693 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 684 - -
Tsu07g03966 693 Pfam Leucine Rich Repeat 189 207 IPR001611 GO:0005515
Tsu07g03966 693 Gene3D Phosphorylase Kinase; domain 1 350 454 - -
Tsu07g03966 693 MobiDBLite consensus disorder prediction 232 278 - -
Tsu07g03966 693 MobiDBLite consensus disorder prediction 248 269 - -
Tsu07g03966 693 Gene3D Transferase(Phosphotransferase) domain 1 455 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03966 Tsu-Chr7 45747795 45750880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03966 25 689 Receptor kinase-like Gene Family AT2G36570 63.798 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu07g03966 Pkinase 2.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03966 - - gmx:100808402 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03966 07 45747795 45750880 Tsu07g03966 07 45747795 45750880 ECH
Tsu07g03966 07 45747795 45750880 Tsu01g02280 01 24139988 24143077 PCT