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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Tsu07g03940
ATGGAAGCTTCCGTGAAGCCAGAATCGGAATCCACAACGGTTTCTCTTGATCAGTCTCACGATGAACGGAAAAATTCTACGGTCAACGGTTGCATTGTTTATACTCGAGTCAAGAGGTCTCTCAATTCTTGTAATGGTTTTTCTGAAGACCTTGATTCGAAGAGATTTAAAGAGAATGCAGAGGTTCCGCTTGAATTCGAGAATGGAATCGATTGCTGCACTGGAAGTAGGGATGGTGAGCTGAAGAGTGAGCAGGTTCCGGTGACGACATTCAAGCGGATTACAAGATCAGCTATGAAAGCGAAGGTTGAGTCCGGTGAAGAGACCGTGACTGTGTTAGAACAACAAGGTGATGCCGTTGGAGCTGTTGATATTGATAATGGCGATGATAAGATGCCCGTGAGGAATTTCAAGCGAATTACACGTTCCGCGATGAAAGAAAAGGTTGAGTCTGGTGAGGATAAGGGGAATGTGATAGAACAACATGGTGCTGATGTTGCAAATGGTAAAGGTGATGGTAAGGTGTCTGTGTCTGTACGGGTTACACGATCGGCTATGAAAGTAAAGGTTGAGTCTGGTGAGGATAAGGATAAGGTGACTGAGTTAGAACAGCATGGTGCTGCTGTTGCAAGTGGTGAAGTTGATAGGACGTTCAAGCGTGTTACACGATCGGCAGCATTGAAAGCGGATGAGGAGATTGTGACAGAGTTAGAACAAGATACTTCTGTGGTTGCGAGTGAAGTTGATGGTGCATTACCTGCTTTGAGAAACAAGATGGAGTTGAAAATGTCGAAGAAGATTGTGGTCAATAAGAAGCCTAAAACAGTCAAGGAGCTCTTCCGTACGGGATTACTTGATGGCATCTCTGTGGTTTACATTCGCGGCATTACGAAGGCGCCGGGATTAAAGGGTGTTATAAGAGATGGAGGAATATTATGTTCATGCTGTCTCTGTAATGGACGCAAGgTTATTCCACCTTCCCAATTTGAGATCCATGCTTGCAAACAATATAAGAGAGCAGTAGAGTATATTTGTCTTGAAAATGGGAAGAGCCTGCTTGATCTGTTGAGAGCGTGCAGGGGAGCTCCCTTGCATGCTTTGTTGgcaacaattcaaaattttgtcTGTTCAACACCTgtggaaaaatattttacttgTAAAATGTGCAAAGGATGTTTTCCATCATGTATGAAAAGAGTGGGACCTATATGCTGTTCTTGTGTAGAATCAAGTAAATCTGAAGAAACTGCCAAGAATGTAGTTGGCAAAAGAATCAGGTCTCCTAGACCAGTGTTGGCCTCCAAATCATCTTGTGCTTCTGAGCTGTCTATCTTTTCAAAAAGTAAGATACAcaagaagaaaagaacaaaGTCATCAATAAGGTTCAGCAGCTCAAATTCTTCCAAGAGTGCTTCTGTGCCCATTCTTCCCCAGAAGAAAATTATGCCGAAGATGAAAAAGAAGTCATCATCCGTAAAGTTGAAGACcacttcaaattcaaattgttTATCTCCACAAAATAAGTGTCAATGGAAGATAACTAAGAAGGACCATCGGCTGCACAGGTTAGTATTTGAGGAAAATGGATTGCCTGATGGAACTGAAGTAGCTTATTATGCAGGCGGACAgAAATTGCTTGAAGGTTTCAAAAGGGGCTCTGGAATTGTTTGCAGATGCTGCAACACAGAGATCAGCCCCTCGCAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAAGAAACCGTATGCATACATTTACACATCAAATGGGGTCTCTCTCCATGAATTATCAATATCTCTCTCAAAAGGCAAAAAATACTCTGCAAATGACAATGATGATCTATGCGTTGTTTGTTGGGATGGTGGAAATCTGTTGCTTTGTGATGGATGCCCGAGAGCATTTCATAAAGAATGTGCATCTCTATCGAGTATTCCACGTGGTGACTGGTACTGTCAATTTTGCCAAAACATGTTCCAGAGGGAAAAGTTTGTCGCATACAATGTTAATGCTTTTGCTGCTGGAAGGGTTGAAGGAGTTGATCCTATTGAGCAAATCACCAAGAGATGCATTCGCATAGTCAAAGACATTGATGCTGAGCTTAGTGGGTGTGCTTTATGCAGGGGTGTTGACTTCAGTAGATCTGGCTTTGGTCCACGCACAATAATACTTTGTGATCAGTGTGAAAAGGAGTATCATATTGGCTGTTTGAGGGATCACAAGATGGCATTTCTAAAGGAATTGCCGAAAGGTAACTGGCTTTGTTGCAATGATTGCACGAGAATACATTCCACTTTGGAGAATGTTTTAGTTAGAGGGGATGAGAGACTCCCTGAATCTCTATTGGCTGTTATAAAGAAAAAGCAAGAGGTAAAAGGATTGGATCCCATGAATGATATCGATGTGAAATGGAGGCTTCTTAGTGGAAAAAACGCTTCTCCTGAAACTAGACCATTGCTTTTGGAGGCTATCTCTATCTTTCATGAATGCTTTGATCCTATAGTTGATGCAGCTAGCGGACGCGACCTTATTCGAGCAATGGTTTATGGAAAGAGTGTGCGGGGTCAAGAGTTTGGAGGAATGTATTGTGCATTACTAATAGTCAATTCATCTGTGGTATCTGCGGGCATGCTTCGAATCTTCGGCACTGAAATTGCTGAACTTCCTATAGTTGCAACAAGTAACAGTCACCATGGGAAGGGCTACTTCCAAACACTATCGTCCTGCATTGAGAGGCTATTGGCTTTCATGAAAGTAAAGAACCTTGTGCTACCAGCCGCAGAAGAAGCACAGTCCATTTGGACAGATAAATTTGGGTTTAGCAAGATTAAACCAGACCAGCTTGCCAACTACAGAAGGAACTGCAATCAGTTTGTGACATTCCAAGGGACAAATATGCTTCATAAAACGGTGCCTCCTTGTCGAATCATCAATACTCATCCTTGA
2943
0.4176
MEASVKPESESTTVSLDQSHDERKNSTVNGCIVYTRVKRSLNSCNGFSEDLDSKRFKENAEVPLEFENGIDCCTGSRDGELKSEQVPVTTFKRITRSAMKAKVESGEETVTVLEQQGDAVGAVDIDNGDDKMPVRNFKRITRSAMKEKVESGEDKGNVIEQHGADVANGKGDGKVSVSVRVTRSAMKVKVESGEDKDKVTELEQHGAAVASGEVDRTFKRVTRSAALKADEEIVTELEQDTSVVASEVDGALPALRNKMELKMSKKIVVNKKPKTVKELFRTGLLDGISVVYIRGITKAPGLKGVIRDGGILCSCCLCNGRKVIPPSQFEIHACKQYKRAVEYICLENGKSLLDLLRACRGAPLHALLATIQNFVCSTPVEKYFTCKMCKGCFPSCMKRVGPICCSCVESSKSEETAKNVVGKRIRSPRPVLASKSSCASELSIFSKSKIHKKKRTKSSIRFSSSNSSKSASVPILPQKKIMPKMKKKSSSVKLKTTSNSNCLSPQNKCQWKITKKDHRLHRLVFEENGLPDGTEVAYYAGGQKLLEGFKRGSGIVCRCCNTEISPSQFEVHAGWASRKKPYAYIYTSNGVSLHELSISLSKGKKYSANDNDDLCVVCWDGGNLLLCDGCPRAFHKECASLSSIPRGDWYCQFCQNMFQREKFVAYNVNAFAAGRVEGVDPIEQITKRCIRIVKDIDAELSGCALCRGVDFSRSGFGPRTIILCDQCEKEYHIGCLRDHKMAFLKELPKGNWLCCNDCTRIHSTLENVLVRGDERLPESLLAVIKKKQEVKGLDPMNDIDVKWRLLSGKNASPETRPLLLEAISIFHECFDPIVDAASGRDLIRAMVYGKSVRGQEFGGMYCALLIVNSSVVSAGMLRIFGTEIAELPIVATSNSHHGKGYFQTLSSCIERLLAFMKVKNLVLPAAEEAQSIWTDKFGFSKIKPDQLANYRRNCNQFVTFQGTNMLHKTVPPCRIINTHP
980
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Tsu07g03940
980
CDD
PHD1_AIRE
614
654
-
-
Tsu07g03940
980
SUPERFAMILY
FYVE/PHD zinc finger
693
756
IPR011011
-
Tsu07g03940
980
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
699
761
IPR013083
-
Tsu07g03940
980
SUPERFAMILY
Acyl-CoA N-acyltransferases (Nat)
858
943
IPR016181
-
Tsu07g03940
980
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
600
692
IPR013083
-
Tsu07g03940
980
ProSiteProfiles
Zinc finger PHD-type profile.
612
657
IPR019787
-
Tsu07g03940
980
MobiDBLite
consensus disorder prediction
455
474
-
-
Tsu07g03940
980
ProSitePatterns
Zinc finger PHD-type signature.
615
654
IPR019786
-
Tsu07g03940
980
PANTHER
AUTOIMMUNE REGULATOR
11
976
-
-
Tsu07g03940
980
Pfam
Tify domain binding domain
549
596
IPR032308
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Tsu07g03940
Tsu-Chr7
45505627
45515133
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Tsu07g03940
265
977
PHD Transcription Factor Family
AT2G36720
53.022
0.0
784
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
PHD
Tsu07g03940
TDBD
1.3e-13
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Tsu07g03940
-
-
cam:101512705
1499.57
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Tsu07g03940
07
45505627
45515133
Tsu01g02320
01
24773618
24782312
PCT
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