Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03917 ATGCTTTGTTTTTCCGTTTCTCACACTTCTCTCCAGGATGCAATATTTCAAGTTGTTGCTGCAATTTTGCATCTTGGGAACATTGAATTTGTGAAAGGGGAGGAGTTTGATTCATCTATGCTCAAAGATGAAAAATCACGGTTCCGCCTGCAGACTGCAGCTGAGCTTTTTATGTGTGATACAAAGGCACTTGAAGATTCTCTTTACAAACGTGTAATTGTTACTCGGGATGAAACAATTACAAAATGGTTGGATCCAGAAGCTGCCGTACTCAGTCGAGATGCTTTGGCTAATATTGTATACACAAGATTGTTTGACTGGTTTGGTTGA 330 0.397 MLCFSVSHTSLQDAIFQVVAAILHLGNIEFVKGEEFDSSMLKDEKSRFRLQTAAELFMCDTKALEDSLYKRVIVTRDETITKWLDPEAAVLSRDALANIVYTRLFDWFG 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03917 109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 107 IPR027417 -
Tsu07g03917 109 PANTHER MYOSIN 12 108 - -
Tsu07g03917 109 Gene3D Myosin VI head, motor domain, U50 subdomain 10 108 - -
Tsu07g03917 109 Pfam Myosin head (motor domain) 10 107 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu07g03917 109 ProSiteProfiles Myosin motor domain profile. 1 109 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu07g03917 109 PANTHER MYOSIN-14 12 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03917 Tsu-Chr7 45313868 45314768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03917 9 108 Myosins gene family AT5G43900 75.000 1.12e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03917 K10357 - gmx:100819463 170.629