Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03913 ATGGTAGTTGCAGAACAAACCACCAATGGTGTCCTTAGTTTCACCTACAAACTTCTCATAGGACGTTGGTTCATGTTATTTGCATCTTCACTAATCATGTCAGTAGCAGGAGCAACCTATATGTTTGGTTTATactcaaaccaaatcaaaacatcTTTGTCCTATGACCAAACAACACTTAACCTTCTTAGTTTCTTCAAAGACCTCGGCGCCAATGTCGGCGTTATTTCCGGTTTAATCAACGAAATAACGCCGCCTTGGGTCGTTCTTTTAACCGGTACCATAATGAATTTCTTTGGTTACTTCATGATATGGCTTtcagttacaaaaaaaattcctaCACCTAAAGTGTGGCAAATGTGTCTTTATATTTGTCTTGGTGCAAATTCTCAAACTTTTACTAATACAGGTGCTTTAGTTACTTGTGTTAAGAATTTTCCTAATAGCAGAGCTTGTTTTCTTATGGTTTTGATTATTGTTCAAAAAGAGTTCAATTTTTCAAGGATTGAGTATATAAGTGATGGAGTTGGTGTTATTTTTTTACTACTTCTTCCACTTGTTGTGGTATTTAGAGAAGAATTAAAATTCAACAAACTCGATAAGGATGGTTCGATATCTCAATTGAAAGTAGTTACTGATGTTCCACTTCGTAATGTGTCATCACACGAAAACGATGTGGAAGTATCAGCAGCTAATGTGAAGTCCGAGAAGAAAATTTCTTGTTGGAGGACGATATTCAAACCTCCAAATAGAGGTGAAGACTATACAATTTTGCAAGCTTTGTTTAGTATTGACATGTTAATTCTTTTCCTAGCAACAACTTTTGGTGTTGGCGGAACATTAACCGCGATTGATAATTTGGGACAAATTGGTCATTCATTAGGATATCCAAATAAAAGTATTACAACTTTCGTGTCGCTTGTGAGTATATGGAATTATCTAGGACGAGTTGCGTCCGGTTATATATCAGAGATCTTATTAACCAAATACAAAATCCCTCGTCCATATCTTCTCACTTTCATTATGCTTCTCTCTTGTGTTGGTCATATTCTAATCGCTCTTGGTATCTCAAACTCTCTTTATATCGCTTCGGTGGTTATTGGATTTTGTTTTGGAGCTCAATGGCCATTGATGTTCGCGATCATATCGGAGATTTTTGGATTGAAATATTATTCAACTTTGTACAATTTTGGAGCAGTGGCTAGTCCTGTGGGATCTTATATATTTAATGTGAGAGTAGCTGGTAATTTATATGATAAAGAAGCTTTGAAACAATTGAAGGCTAAGGGACTAAAGAGAGAAGAAGGGAAGGACTTAACTTGTGTTGGAGTAGAGTGTTATAGGACTAGAAAATTTTATAAAGGGGATGTATATAGAAAGTATAGGGAAGAACTTGAAGCAGCAGAGGCTGAGATGGGGATTGTGAAAAATGGTGATGTTGTGTATGAAAGGGAAGACAATGGCAACGCGGCATTAGGTGCCGCTGGGGTTACTCGTAGTCCCCCACGGGACGTCCGAGTCTAA 1524 0.3635 MVVAEQTTNGVLSFTYKLLIGRWFMLFASSLIMSVAGATYMFGLYSNQIKTSLSYDQTTLNLLSFFKDLGANVGVISGLINEITPPWVVLLTGTIMNFFGYFMIWLSVTKKIPTPKVWQMCLYICLGANSQTFTNTGALVTCVKNFPNSRACFLMVLIIVQKEFNFSRIEYISDGVGVIFLLLLPLVVVFREELKFNKLDKDGSISQLKVVTDVPLRNVSSHENDVEVSAANVKSEKKISCWRTIFKPPNRGEDYTILQALFSIDMLILFLATTFGVGGTLTAIDNLGQIGHSLGYPNKSITTFVSLVSIWNYLGRVASGYISEILLTKYKIPRPYLLTFIMLLSCVGHILIALGISNSLYIASVVIGFCFGAQWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYIFNVRVAGNLYDKEALKQLKAKGLKREEGKDLTCVGVECYRTRKFYKGDVYRKYREELEAAEAEMGIVKNGDVVYEREDNGNAALGAAGVTRSPPRDVRV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03913 507 Pfam Major Facilitator Superfamily 177 401 IPR011701 GO:0022857|GO:0055085
Tsu07g03913 507 Pfam Nodulin-like 22 151 IPR010658 -
Tsu07g03913 507 Gene3D MFS general substrate transporter like domains 252 420 IPR036259 -
Tsu07g03913 507 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 151 449 - -
Tsu07g03913 507 PANTHER MFS TRANSPORTER 151 449 - -
Tsu07g03913 507 PANTHER MFS TRANSPORTER 448 485 - -
Tsu07g03913 507 Coils Coil 458 478 - -
Tsu07g03913 507 PANTHER MFS TRANSPORTER 9 151 - -
Tsu07g03913 507 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 151 - -
Tsu07g03913 507 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 448 485 - -
Tsu07g03913 507 CDD MFS_Mch1p_like 21 449 - -
Tsu07g03913 507 SUPERFAMILY MFS general substrate transporter 23 410 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03913 Tsu-Chr7 45274669 45276513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03913 21 472 Nodulin-like Gene Family AT2G28120 50.909 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03913 - - lja:Lj1g3v4626560.1 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03913 07 45274669 45276513 Tsu01g04925 01 56187186 56189297 ECH
Tsu07g03913 07 45274669 45276513 Tsu07g03913 07 45274669 45276513 ECH