Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03901 ATGGAAGGTAAAAAAGATGAAGATTTTGGTGCTTTATCTGCATCATTCTTTTCTTCCTTCTTGGATGATCACAATGATGAGAATTATAATGCAGTTGCTGAAAAGGAGGATGTGATTCTCCTCCGTTTCCCAATTTGCTGTGTCACGGGACACGGATACACCGGAAAAACCGTACTGCTGAATTATATTCGAGGTGACCCCGATTTTCAATATGATCCCACAAAACGTATCGGTGCTACATATGTTCCTTCTGATTACATagtcaaaaaaacaaaggaaTTGAAACCTGATAATCATAATGATAACTTTCCTGGTTTACTGTTTCTTGATACCCCAGGTCTCACTTCATTTACTAATATAATGTCTCAGGGTTTAGCTCTATGTGATATTGCAATCTTGTTTGTCGACATTGTTGGCGGCATAAAGCCACAAACAATTCAATCGCTCAATCTTTTACTATCCTCTAACAAAAAGTTTATTATTGCCTTGAATAAGATTGACATGTTTTTTCAGTGGAAACCATGTTACAATGCTCCATTTGCTAAAGCATATAAGCAACAGTGTATGGATACTCAAAATGCTTTTAATATGAAGCTCACTCAGATTATCAGCCAGTTCAAAGAACATGGTATAAGTACAGAGATATATtggaaaaacaaagaaatgggAGAAACAATCAGCATTGTGCCAATAAGTGCAAAATGTGGTGAAGGAATCCCGGATCTGTTATTACTACTGGTTATGTACTCAAAAACCATGCTTGATAAACTTACATACAAGGAAGAATTGCAGTGTACTATTTTGGATGTCGGTTTTCATAAAGGCAGAGGAACGATGATACATGTTGTTTTAATGAACGGTACTATTTGCGAAGGAGATCGAATAGTTGTATGTGGGAGGAAGGGGCAAATTCTTACCTCAATTCAATCTTTATGGGCACCTCGTCCAAGGGAAGAACTTGGTGTTAAGGGAAACTATCTccaatacaaaaaaatcaaaggtGTGATGCCTATCAAGATCTTTGCCCAGGGGATTGAAGATGCTATTCGTGGAAGTAATTTATATTTGGTGAATCCTGGTGATGATTCCAAAGATGTTGAAGAAACAATCTTGGAAGATAAGAAACAACAGGATTAA 1137 0.3527 MEGKKDEDFGALSASFFSSFLDDHNDENYNAVAEKEDVILLRFPICCVTGHGYTGKTVLLNYIRGDPDFQYDPTKRIGATYVPSDYIVKKTKELKPDNHNDNFPGLLFLDTPGLTSFTNIMSQGLALCDIAILFVDIVGGIKPQTIQSLNLLLSSNKKFIIALNKIDMFFQWKPCYNAPFAKAYKQQCMDTQNAFNMKLTQIISQFKEHGISTEIYWKNKEMGETISIVPISAKCGEGIPDLLLLLVMYSKTMLDKLTYKEELQCTILDVGFHKGRGTMIHVVLMNGTICEGDRIVVCGRKGQILTSIQSLWAPRPREELGVKGNYLQYKKIKGVMPIKIFAQGIEDAIRGSNLYLVNPGDDSKDVEETILEDKKQQD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03901 378 Pfam Elongation factor Tu GTP binding domain 101 249 IPR000795 GO:0003924|GO:0005525
Tsu07g03901 378 Gene3D Translation factors 261 377 - -
Tsu07g03901 378 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B 29 375 - -
Tsu07g03901 378 Gene3D - 39 260 IPR027417 -
Tsu07g03901 378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 317 IPR027417 -
Tsu07g03901 378 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 29 375 IPR015760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03901 Tsu-Chr7 45170155 45172433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03901 41 373 Eukaryotic Initiation Factors Gene Family AT1G76810 54.599 1.38e-117 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03901 K03243 - gmx:100814640 366.696