Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03893 ATGGGAAAATCAAGCTTTTCTTCTAAGGGATTTTGGAAAGGAGGGTTAGGAATAATGATGAGAAAAGTagtagagaaaaaaatattatggtcAGAAAAAGGAGTGAAGCAAGGTCATTTTGTGGTGATTGCAACACAAGGGTGGAAAGCTGAGAGATTTTGTATTGAATTAGGATATTTAGATCATCCTGAATTTgtgaaattattaaaacaaGCTGAAGAAGAGTTTGGATTTTCTCAAGTTGGAGCACTTGAAATTCCTTGTGAACCAGATGAGTTGAAGAGAATCATTGGAAGGAAAAAACAACACATCAACAAGGGTATTACTATTACTTGTTAG 339 0.3156 MGKSSFSSKGFWKGGLGIMMRKVVEKKILWSEKGVKQGHFVVIATQGWKAERFCIELGYLDHPEFVKLLKQAEEEFGFSQVGALEIPCEPDELKRIIGRKKQHINKGITITC 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03893 112 Pfam Auxin responsive protein 32 97 IPR003676 GO:0009733
Tsu07g03893 112 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 112 IPR003676 GO:0009733
Tsu07g03893 112 PANTHER SMALL AUXIN-UP RNA-RELATED 16 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03893 Tsu-Chr7 45083447 45083785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03893 35 98 Calmodulin-binding Proteins AT4G34750 40.625 2.71e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03893 - K14488 gmx:100795119 144.436