Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03891 ATGGAGGTTACAAAGAAGTTGAAGCTAAAGTCTTTGATATCAAAGGTGTTAAAGGGTCTTCAATTTTTGGAAATTAGTAAAGCATGTACAAGAAGAGGTAATTATGTGAGAATTAGAGATATTGATGATGGTGAAGATAAAGAGAATGAAAATGTAACAATGGTGCCACAAGGTTTTTTTGCGGTTATAGCAATGCAAGGTGAAGAACCAATGAGATTTGTTCTTGAGTTGGAATATTTAAGGGATCATCATTTCATGAAATTATTGGAGAAAGCTAAGGAAGAATTTGGATATGAACAAAAGGGTGCTCTTGCATTGCCTTGTAGACCTCAAGATCTTCAAAAGATTATAGAGAATCGACATAATACAACTTTGTAA 378 0.3333 MEVTKKLKLKSLISKVLKGLQFLEISKACTRRGNYVRIRDIDDGEDKENENVTMVPQGFFAVIAMQGEEPMRFVLELEYLRDHHFMKLLEKAKEEFGYEQKGALALPCRPQDLQKIIENRHNTTL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03891 125 PANTHER F8A24.8 PROTEIN 8 122 - -
Tsu07g03891 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 122 IPR003676 GO:0009733
Tsu07g03891 125 Pfam Auxin responsive protein 47 117 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03891 Tsu-Chr7 45066422 45066938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03891 4 108 Calmodulin-binding Proteins AT5G20810 37.736 2.28e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03891 - K14488 gmx:100794597 117.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03891 07 45066422 45066938 Tsu01g02387 01 25659608 25659889 PCT