Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03886 ATGCAAGTAGTCCTGACTGGTATTATGAAGTGTTTTCCATTCCACTCTGGAGATAAGAAAGATGAACCGAAAGGCTTGCAATCCGCGTCCGGTCGTTCAGAAAGTTCCACATATGTTGATGCTGAAGGTAAAAGGTATAGTTCTGAATTGAATTCTCAGGATGTCTCGGATAGTGGCAGCGTGGACTCCCTCAGAAGGAACGCGCCTCCCAATATGTCCCAAAGACCTAGCAACCTTAGAGTGTTTACTGTATCTGAACTGAAATCAGCCACAAAGAATTTCAGTCGGTCTGTTATGCTTGGAGAGGGCGGGTTCGGTTGTGTCTATCAGGGTGTAATTAGAAGTGTAGATGATCCATCTAGAAGAATTGAGGTTGCAGTGAAACAACTTAGTAAAAGAGGAGTGCAGGGGCACAGGGAATGGGTGACGGAAGTGAATGTTCTAGGCATTGTTGAGCATCCCAATCTTGTGAAACTAGTGGGCTACTGCGCCGATGATGACGAAAGAGGTATCCAGCGGCTTCTGATATATGAATACATGCCGAACAGAAGTGTGGAACACCATTTATCTCACCGAGCAGTGACTCCTCTCCCGTGGAGTAGGAGAATAAAAATAGCACAAGACGCTGCTCGTGGATTAACATACCTGCACGAGGAAATGGATTTTCAGATAATTTTCAGAGatttcaaatcttcaaacatCCTTCTGGATGATCAGTGGAATGCAAAGCTATCAGACTTTGGGTTAGCAAGACTTGGACCATCGGATGGACTAACCCATGTCTCAACAGcgGTTGTAGGAACAATGGGGTACGCAGCTCCTGAGTATCTCCAAACTGGACGTCTCACATCAAAGAATGACGTATGGAGCTACGGTGTTTTCCTTTATGAACTCATTACTGGCAGGCGCCCTTTAGATCGAAATCTCCCCAGAGGTGAACAGAAGCTGCTGGAATGGATAAAACCATACCTATCAGATGCAAAGAAATTTCAACTTATATTGGATCCAAGACTTGATAAGAAACAAGTAATCAAATCAGCCCAAAAACTTTCAACGATAGCTAACCGATGCTTAGTTAAAAATCCAAAGAGTCGACCAAAGATGAGCGAGGTTCTGCAAATGGTGAACGGAATAGTAGAATCATCATCTAGTGATACTTCACATATACCCTCGAAGAATGTTTCTAGAGTAGAAGTTTCACACGACGCTGAAATAAACACGAAGAAGAAACGGACTATGGATCAGAAGCCTGGAGAAAGTAATTGGTTTGTTAGGATGTGGAGACCAAAGCTTGTAAGAACATGTTAA 1308 0.4289 MQVVLTGIMKCFPFHSGDKKDEPKGLQSASGRSESSTYVDAEGKRYSSELNSQDVSDSGSVDSLRRNAPPNMSQRPSNLRVFTVSELKSATKNFSRSVMLGEGGFGCVYQGVIRSVDDPSRRIEVAVKQLSKRGVQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSHRAVTPLPWSRRIKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYLQTGRLTSKNDVWSYGVFLYELITGRRPLDRNLPRGEQKLLEWIKPYLSDAKKFQLILDPRLDKKQVIKSAQKLSTIANRCLVKNPKSRPKMSEVLQMVNGIVESSSSDTSHIPSKNVSRVEVSHDAEINTKKKRTMDQKPGESNWFVRMWRPKLVRTC 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03886 435 CDD STKc_IRAK 100 378 - -
Tsu07g03886 435 PANTHER OS01G0588500 PROTEIN-RELATED 17 430 - -
Tsu07g03886 435 Gene3D Transferase(Phosphotransferase) domain 1 180 403 - -
Tsu07g03886 435 MobiDBLite consensus disorder prediction 28 78 - -
Tsu07g03886 435 ProSiteProfiles Protein kinase domain profile. 94 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03886 435 ProSitePatterns Protein kinases ATP-binding region signature. 100 128 IPR017441 GO:0005524
Tsu07g03886 435 SUPERFAMILY Protein kinase-like (PK-like) 70 375 IPR011009 -
Tsu07g03886 435 Gene3D Phosphorylase Kinase; domain 1 66 179 - -
Tsu07g03886 435 PANTHER KINASE 1B 17 430 - -
Tsu07g03886 435 Pfam Protein kinase domain 96 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03886 435 MobiDBLite consensus disorder prediction 19 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03886 Tsu-Chr7 45013416 45017878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03886 9 390 Glycoside Hydrolase AT3G07070 39.386 4.30e-88 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu07g03886 Pkinase 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03886 - - gsj:114400704 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03886 07 45013416 45017878 Tsu07g03886 07 45013416 45017878 ECH