Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03862 ATGGACAAAAATCCTCATTCCGAAATTCAACTCCCTCCTGGATTTAGATTTCATCCTTCTGATGCAGAACTTATTGTTCACTATCTAAGAAACAAAGTGAATTCATCTCCTCTTCCTGCTTCATTCATAGCAGAAATAGATCTTTACAAATACAATCCATGGGAGCTTCCAAGTAAATCTTTGTTTGGAGAGGAAGAGTGGTATTTCTTTACTCCAAGGGACAGAAAGTATCCCAAAGGATTGAGGCCTAATAGAGCAGCTGGTGCAGGTTATTGGAAAGCTACTGGAACTGATAAACCTATTCTTACTTCATGTGGGTTGAAAAGCATTGGAGTCAAGAAAGCCCTAGTGTTCTATAAGGGACGTCCACCAAAAGGATCTAAAACTGACTGGATCATGCATGAGTATAGGCTGCATGACTCAATGATCTCAAATTCTAAGCATAGTGGTTCTATGAGACTGGATGAGTGGGTGTTATGCCGAGTTCGACAAAAAATTGGAAGtccaagaagcagttgggaAGATTCAAATGAACTAAGTTATGACCCAACAAATCAGTTTCAACAAATGAATGAGATCTCTAATCCTGAACCAATCAAAAACTTTGTGCAGAATGAATACCCGATGTTACCTTATATTTTGGCTTCTAAGACTGTTCTGCCTAATTCCATTGGTATGGCCTCAGACAATGTAAAGCCTCATGCTTCATTTTATGAAGACAACTTAAACATAATAGGAGCACAGTTCTTGTCATCTGCTACTGAGGGATTGTTCAATCCGCTGAAGAGAAAAGCAGTCGAAGATGACATCGAGATGGACTTTTATGCTGTCCTCAATAAAGATTTAAGCAAAGAGTACAATTTCTACAACTTTGATCAGTGGACTTCAACCATACAACCTCAAGAGCTTAATAGCTTAGCCTTCACTGGATATACATAA 939 0.3781 MDKNPHSEIQLPPGFRFHPSDAELIVHYLRNKVNSSPLPASFIAEIDLYKYNPWELPSKSLFGEEEWYFFTPRDRKYPKGLRPNRAAGAGYWKATGTDKPILTSCGLKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLHDSMISNSKHSGSMRLDEWVLCRVRQKIGSPRSSWEDSNELSYDPTNQFQQMNEISNPEPIKNFVQNEYPMLPYILASKTVLPNSIGMASDNVKPHASFYEDNLNIIGAQFLSSATEGLFNPLKRKAVEDDIEMDFYAVLNKDLSKEYNFYNFDQWTSTIQPQELNSLAFTGYT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03862 312 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Tsu07g03862 312 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Tsu07g03862 312 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 287 - -
Tsu07g03862 312 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Tsu07g03862 312 Gene3D NAC domain 20 167 IPR036093 GO:0003677|GO:0006355
Tsu07g03862 312 PANTHER NAC TRANSCRIPTION FACTOR 56 2 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03862 Tsu-Chr7 44750368 44751751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03862 7 170 NAC Transcription Factor Family AT1G69490 67.683 4.19e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu07g03862 NAM 4.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03862 - - cam:101491216 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03862 07 44750368 44751751 Tsu07g03862 07 44750368 44751751 ECH