Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03861 ATGAGCGTCATCGACATTCTAACCCGAGTGGATTCAATTTGCAAGAAATACGACAGATACGACGTCGTTAAGCAAAACGATTCCAATTTCCCCGCCGACGACGCATTCGCCAAACTCTACTCCGTCGCCGACGCCGACATAGAGGCTGCACTTCAGAAAGCAGAAACTGCTTCTAAGGAGAAAAATAGGGCTTCAACTGTAGCGATCAATGCCGAAATTCGTCGTACTAAGGCTAGGTTACTTGATGAGATTCCCAAGTTACAGAGATTGGCAGTAAAAAAGGTAAAGGGGCTTTCGTCGCAAGAATTTGCTGCCCGTAATGATTTGGTTCTTTCATTGCCAGAGAGGATCCAAGCTATCCCGGATGGGACACCTGCTGCACCCAAACAAACTGGAGGTTGGGGAGCTTCTGCCTCACGTCctgaaattaaatttgattcagATGGCCGATTAGATGATGGATACTTTGAACAAACCGAAGAATCAAGTCAGTTTAGGCAGGAGTATGAAATGCGTAAAATGAAACAGGATCAAGGTTTGGATGTGATTGCAGAAGGATTGGATACTTTGAAAAACATGGCACACGATATGAATGAGGAATTTGATAAGCAAGTTCCATTGATGGATGAGATTGATACAAAGGTGGACAAGGCATCCTCTGACCTTAAAAATACCAATGTTAGACTTAAAGACACAGTTACCCAGCTACGATCCAGTCGAAACTTCTGTATTGATATTGTTATGTTGATTATAATTTTGGGAATTGCTGCCTATTTGTACAATGTGCTAAAATGA 795 0.4189 MSVIDILTRVDSICKKYDRYDVVKQNDSNFPADDAFAKLYSVADADIEAALQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAVKKVKGLSSQEFAARNDLVLSLPERIQAIPDGTPAAPKQTGGWGASASRPEIKFDSDGRLDDGYFEQTEESSQFRQEYEMRKMKQDQGLDVIAEGLDTLKNMAHDMNEEFDKQVPLMDEIDTKVDKASSDLKNTNVRLKDTVTQLRSSRNFCIDIVMLIIILGIAAYLYNVLK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03861 264 Gene3D - 170 231 - -
Tsu07g03861 264 PANTHER SYNTAXIN-73 1 261 - -
Tsu07g03861 264 CDD SNARE_Qc 175 230 - -
Tsu07g03861 264 PANTHER SYNTAXIN 1 261 IPR045242 -
Tsu07g03861 264 Pfam SNARE domain 207 256 IPR000727 -
Tsu07g03861 264 SMART tSNARE_6 165 232 IPR000727 -
Tsu07g03861 264 SUPERFAMILY SNARE fusion complex 163 230 - -
Tsu07g03861 264 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Tsu07g03861 264 MobiDBLite consensus disorder prediction 122 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03861 Tsu-Chr7 44746118 44748993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03861 1 264 SNARE and Associated Proteins AT3G09740 74.812 4.02e-150 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03861 K08506 - gmx:100804155 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03861 07 44746118 44748993 Tsu07g03861 07 44746118 44748993 ECH