Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03856 ATGGCTGATGACTTTGATTTTTCCGATAAAATTCCACCTTCCTTCGATCGCGTGAATGCTGGATCTCAAGGGTTCAACCCAGGCTTAATAGTTCTCTTGGTTGTTGGTGGGTTGCTATTGACATTCCTCGTTGGAAATTACGCGCTCTACGTTTATGCACAGAAGACCATCGGTCCAAGAAAAAAGAAGCCAGTCtcaaaaaagaagatgaaaaaggaGAGACTGAAGCAAGGCGTCTCCACACCAGGAGAGTAG 255 0.4235 MADDFDFSDKIPPSFDRVNAGSQGFNPGLIVLLVVGGLLLTFLVGNYALYVYAQKTIGPRKKKPVSKKKMKKERLKQGVSTPGE 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03856 84 MobiDBLite consensus disorder prediction 58 84 - -
Tsu07g03856 84 PANTHER DNA-BINDING PROTEIN S1FA2 3 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
Tsu07g03856 84 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 84 - -
Tsu07g03856 84 MobiDBLite consensus disorder prediction 60 74 - -
Tsu07g03856 84 Pfam DNA binding protein S1FA 21 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03856 Tsu-Chr7 44711450 44713979 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Tsu07g03856 S1FA 1.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03856 - - gmx:100499820 127.872