Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03849 ATGGGGAAGAAGGGAAATTGGTTTTCTAATGTGAAGAAAGCTCTCAGCCCTGATTCAAAGaaatcaagtaaatcaaaGAAGAAATGGTTTGGGAAGGAAAAATTGAAGATTTCAGACCCTTCTTTAGAAACCGATACAGCACCGCCTCTTCCTCCACCGGAAGATATTAAATTAACTGATATTGAAAGTCAAATCAGTCACCATCATGTTGCTGAAATTACAACTTCCGTGGTTGATGACAAACCTGGTCCTTCTGTTCAGGCAGCAGTTATTAGGACTGAAGCTGTCGTAGTTTCTCGTTTTGCCGGTAAACCAAAGGATGAAGTGGCCGCAATCAAGATTCAGACAGCTTTTCGAGGATACTTGGCGAGAAGAGCATTGCGGGCTTTACGAGGGTTGGTCAGATTGAAAACATTGATGGAAGGGCCCATTGTAAAACGGCAAGCCATGAGTACCCTCCGCTCAATGCAGACATTAGCTCGTGTGCAATCTCAGATTCGTTCTAGGAGGGTTAGAATGTTAGAGGAGAATCAGGCTTTGCAGAGACAGCTCTTACAGAAGCATGCAAGAGAACTTGAGACCATGCGGATTGGAGAGGAATGGGATGATAGTCTACAATCAAAAGAACAAATTGAAGCCAAATTATTGAGCAAGTATGAGGCTACTATGAGAAGAGAAAGAGCATTGGCTTATGCGTTCACTCATCAgCAAAATGGGAAGAATTCATCTAGATCTATGAATCCAATGTTCGTGGATCCAACCAATCCTACATGGGGCTGGAGCTGGCTAGAACGATGGATGGCTGCCCGACCTTGGGAGAGCCGTGGCCTTGCCGATAAAGAACTGAATGACCATTCATCCATTAAAAGTTCAAGCCGCAGCATTACTGCTGGAGAAATCAGCAAATCGTTTGCTCGTTTCCAGCTAAATTCCGAAATACATTCTCCAGCAGCCAGCCAAATTGCCGGCTCACCTAGTTTTCAGTCCAATTCAACTCCTACTAAGCCAGGTTCTGCAGGAGTTGCAAGGAAACTGAAGAAGGCGAGTCCAAAGGGAAGCTGGGTTATGGAAGATGACTCAAAAAGCATGGCCAGTGTACAGTCAGATCGGTTCCGTAGGCACTCTATTGCCGGATCATCAGTTAGAGATGATGAGAGTCTTGCTAGCTCTCCATCAGTTCCGAGTTATATGGTTCCGACTCAATCTGCAAAAGCTAGGTCGAGGACACAGAGTCAAAGTCCATTAGCTAAAGAAAATGGCAAACAAGATAAGGGATCCTTTGGGACTGCAAAGAAGCGTCTTTCTTTCCCGGCTTCACCTGCCAGGCCAAGACGTCATTCAGGTCCACCAAAGGTAGAAACCGCCATAAATGCAGAGTTGACAGTGGACAATGGTGTGGCAAGTTGA 1407 0.4492 MGKKGNWFSNVKKALSPDSKKSSKSKKKWFGKEKLKISDPSLETDTAPPLPPPEDIKLTDIESQISHHHVAEITTSVVDDKPGPSVQAAVIRTEAVVVSRFAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKTLMEGPIVKRQAMSTLRSMQTLARVQSQIRSRRVRMLEENQALQRQLLQKHARELETMRIGEEWDDSLQSKEQIEAKLLSKYEATMRRERALAYAFTHQQNGKNSSRSMNPMFVDPTNPTWGWSWLERWMAARPWESRGLADKELNDHSSIKSSSRSITAGEISKSFARFQLNSEIHSPAASQIAGSPSFQSNSTPTKPGSAGVARKLKKASPKGSWVMEDDSKSMASVQSDRFRRHSIAGSSVRDDESLASSPSVPSYMVPTQSAKARSRTQSQSPLAKENGKQDKGSFGTAKKRLSFPASPARPRRHSGPPKVETAINAELTVDNGVAS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03849 468 MobiDBLite consensus disorder prediction 382 419 - -
Tsu07g03849 468 Pfam Protein of unknown function (DUF4005) 383 444 IPR025064 -
Tsu07g03849 468 MobiDBLite consensus disorder prediction 319 468 - -
Tsu07g03849 468 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 464 - -
Tsu07g03849 468 PANTHER IQ-DOMAIN 5-RELATED 1 464 - -
Tsu07g03849 468 MobiDBLite consensus disorder prediction 1 53 - -
Tsu07g03849 468 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
Tsu07g03849 468 SMART iq_5 106 128 IPR000048 GO:0005515
Tsu07g03849 468 Pfam IQ calmodulin-binding motif 110 128 IPR000048 GO:0005515
Tsu07g03849 468 Gene3D - 68 138 - -
Tsu07g03849 468 MobiDBLite consensus disorder prediction 319 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03849 Tsu-Chr7 44663737 44667439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03849 1 468 IQD Protein Family AT5G03040 52.846 3.65e-147 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03849 - - gmx:100800080 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03849 07 44663737 44667439 Tsu07g03849 07 44663737 44667439 ECH
Tsu07g03849 07 44663737 44667439 Tsu01g02474 01 26990710 26994453 PCT