Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03843 ATGGATACATACGAGTTAATGGACTTTTACTTTCCTCAACAACTCTTCACTGTTGAAGAAACCTGGCTCAATCTcacttcttctcttttttccttcttttcttcTCAAGGCCAAAACATCGTTTCTCAGGTGAAAAATGAATTTGGAAACTATGTATTGTCACTTGATTTTCAGCAGCTCAAAAATACGTGTAATGTTGCGGAGTTTTATGAAATGTTAATGGAGAAACCTAAAATTGCTCTCTTATGCATGAGTGCTGCCATTCACAAGGTTCTGCTTTCTGAATGGGAGAACGAGAAGCTGGAGCTTGCTGCAAAAGTAAACATCCGTCTTCATAACTGTCCTGAAACTATGATCGCCCTGAAGAACTTAAAAGCAGCTTATATAGACAAGCTTGTCTCAGTACGTGGTACCGCTGTGAAAGCCAGCACTGTTAGACCTCTTGTGGTAGAAATGAGTTTTGAATGCAGTAAGTGCAAACAAAGTATTACACGTATATTTCCTGACGGGAAATTTTCACCGCCATCAAGTTGCAATTTGAATGGCTGCAAAAGCAAAATCTTCAATCCACTGCGATCTACTGCTCAAACTATTGATTTTCAGAAAATAAGGGTTCAAGAGTTATTAAAGCATGAAGATCATGAGGAAGGACGGGTGCCTCGAACAGTCGAATGTGAACTTACCCAAGATCTCGTTGATTCATGCATTCCTGGAGATGTGGTGACAGTTACAGGAATTATCAGAGGAATTAACAATTACATGGATATTGGAGGAGGAAAGTCAAAGAACAGAAACCAAGGATTTTACTATTTGTATCTCGAAGCTGTATCCATAATAAATTCAAAGTCACAGTCCATATCTGATGATTCACAAGACTGTAATGCAAAAGCAAGACCAACTGAGCTGTCtgatttgttttcattttcttcaaagGATTTAGAATTTGTAGTGAAATTTGCGCAGGAGCACCATCCAAATTTATTTCGGCAAATCCTTCACTCTATATGCCCTTCCATCTATGGGCACGAGCTTGTTAAAGCTGGGATAACACTAGCATTATTTGGCGGTGTCCGTAAGCATTCTATGGATCAGAATAAGGTTCCTGTGAGGGGAGATATTCATGTCTTAATTGTAGGTGATCCCGGTCTAGGTAAGAGCCAGTTGTTACAAGCAGCAGCAGCTGCTTCTCCACGTGGTATTTATGTCTGTGGTAATGCCACAACCAAAGCTGGCCTCACAGTAGCTGTAGTTAAGGATCCTATGACAAATGACTATGCTTTTGAGGCAGGTGCTATGGTACTGGCTGACAGTGGATTGTGCTGTATTGatgagtttgataaaatgacCTCAGAGCATCAGGCTTTGCTGGAGGCAATGGAGCAACAGTGTGTCTCTATTGCAAAGGCAGGACTGGTAGCGAGTTTATCATCCCGAACTTCTGTCTTAGCTGCTGCAAACCCCGTCGGTGGTCATTATaaCCGGGCAAAAACTgtaaatgaaaatttaaaaatgagtgCTGCACTATTGTCCCgttttgatttaattttcatattacTGGACAAGCCTGATGAACTTTTGGACAAGCGGGTCTCGGAGCACATTATGTCGCTTCATGCTGGGAGCGGGCAACACTTACAGGCATCTAAAAAGCGACGTGGAGATCCACCTTCTGCATCGCAGAATGTTGAAGTGGTAGATTTGAGTGTTAGATCTGGTTCTTTAATTTCAAGGTTGAAACTTGACAGACGAAACGATGGCAAATTTGCTCCATTACCCGGTCAACTTCTTCGCAAATACATTGCTTATGCAAGGAGTTTTGTCTTTCCCAGGTTGATGTCTAAGCCAGCAGCGGATATCATACAAAAGTTTTACCTAAAACTTCGAGATCATAATGTTTCGGCTGATGGTACTCCTATAACAGCAAGGCAGCTGGAAAGTCTAGTAAGGTTAGCTGAAGCTCGTGCCCGGATGGACTTGAGAGTAGAAATAACGGCCCAAGATGCAATGGATGTTGTTGAAATCATGAAGGAATCCCTGtatgataaatatgttgacGAACACGGTGTTGTGGATTTTGGTCGAAGTGGGGGGATGAGTCAGCAGAAAGAAGCAAAACGCTTTCTAAATGCCCTCAATAAGCAATCAGAGCTGGAACAGAAAGATTGTTTTTCAGTATCTGAAATATACAGTTTGGCAGATAGGATTTCCTTGAAAGTACCTGATATGGATACATTCATCGAGAATTTAAACACCGCTGGTTATCTACTCAAAAAAGGAGCAAAGACATACCAGGTGTTATCCTCTTCTTACTCGCGGAGCCAATCGTCTAGGTCAAGGGGCTAA 2343 0.3995 MDTYELMDFYFPQQLFTVEETWLNLTSSLFSFFSSQGQNIVSQVKNEFGNYVLSLDFQQLKNTCNVAEFYEMLMEKPKIALLCMSAAIHKVLLSEWENEKLELAAKVNIRLHNCPETMIALKNLKAAYIDKLVSVRGTAVKASTVRPLVVEMSFECSKCKQSITRIFPDGKFSPPSSCNLNGCKSKIFNPLRSTAQTIDFQKIRVQELLKHEDHEEGRVPRTVECELTQDLVDSCIPGDVVTVTGIIRGINNYMDIGGGKSKNRNQGFYYLYLEAVSIINSKSQSISDDSQDCNAKARPTELSDLFSFSSKDLEFVVKFAQEHHPNLFRQILHSICPSIYGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVLIVGDPGLGKSQLLQAAAAASPRGIYVCGNATTKAGLTVAVVKDPMTNDYAFEAGAMVLADSGLCCIDEFDKMTSEHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRVSEHIMSLHAGSGQHLQASKKRRGDPPSASQNVEVVDLSVRSGSLISRLKLDRRNDGKFAPLPGQLLRKYIAYARSFVFPRLMSKPAADIIQKFYLKLRDHNVSADGTPITARQLESLVRLAEARARMDLRVEITAQDAMDVVEIMKESLYDKYVDEHGVVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSVSEIYSLADRISLKVPDMDTFIENLNTAGYLLKKGAKTYQVLSSSYSRSQSSRSRG 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03843 780 Gene3D - 121 250 IPR012340 -
Tsu07g03843 780 SMART mcm 117 680 IPR031327 GO:0003677|GO:0005524|GO:0032508
Tsu07g03843 780 PRINTS Mini-chromosome maintenance (MCM) protein family signature 457 470 IPR001208 GO:0003677|GO:0005524|GO:0032508
Tsu07g03843 780 PRINTS Mini-chromosome maintenance (MCM) protein family signature 430 444 IPR001208 GO:0003677|GO:0005524|GO:0032508
Tsu07g03843 780 PRINTS Mini-chromosome maintenance (MCM) protein family signature 481 493 IPR001208 GO:0003677|GO:0005524|GO:0032508
Tsu07g03843 780 PRINTS Mini-chromosome maintenance (MCM) protein family signature 370 385 IPR001208 GO:0003677|GO:0005524|GO:0032508
Tsu07g03843 780 PRINTS Mini-chromosome maintenance (MCM) protein family signature 508 516 IPR001208 GO:0003677|GO:0005524|GO:0032508
Tsu07g03843 780 Pfam MCM P-loop domain 323 538 IPR001208 GO:0003677|GO:0005524|GO:0032508
Tsu07g03843 780 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 5 775 IPR031327 GO:0003677|GO:0005524|GO:0032508
Tsu07g03843 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 337 685 IPR027417 -
Tsu07g03843 780 Gene3D - 148 198 - -
Tsu07g03843 780 PANTHER DNA HELICASE MCM8 5 775 - -
Tsu07g03843 780 MobiDBLite consensus disorder prediction 541 560 - -
Tsu07g03843 780 Pfam MCM AAA-lid domain 595 679 IPR041562 -
Tsu07g03843 780 CDD MCM8 331 678 - -
Tsu07g03843 780 SMART AAA_5 371 523 IPR003593 -
Tsu07g03843 780 Gene3D - 305 689 IPR027417 -
Tsu07g03843 780 SUPERFAMILY Nucleic acid-binding proteins 47 251 IPR012340 -
Tsu07g03843 780 ProSiteProfiles MCM family domain profile. 327 534 IPR001208 GO:0003677|GO:0005524|GO:0032508
Tsu07g03843 780 Pfam MCM OB domain 121 249 IPR033762 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03843 Tsu-Chr7 44626796 44633181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03843 16 766 Core DNA Replication Machinery Family AT3G09660 73.041 0.0 1140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03843 K10737 - gmx:100784549 1261.51