Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03842 ATGTCTGACGCTCCGGCGAGTCCAGGTGGTGGAAGTCACGAAAGCGGCGAACACAGTCCTCGTTCTAACATCCGTGAACAGGATAGGTTTCTTCCAATCGCTAATATCAGTCGTATCATGAAAAAAGCTCTACCTGCTAATGGCAAAATTGCTAAAGATGCTAAAGAAACTGTTCAGGAATGTGTTTCTGAGTTCATAAGCTTTATCACCAGCGAGGCCTCTGATAAGTGTCagagagagaagaggaagaCGATTAACGGCGATGATTTGCTTTGGGCTATGGCTACTTTAGGGTTTGAGGATTATATTGATCCTCTTAAGATTTACCTTACAAGATACAGAGAGGTTATTGTTAATTTCAATttactgtttttcaaaattttcaatttttttttttgcttttctggTCCCCAGTGA 417 0.3621 MSDAPASPGGGSHESGEHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREVIVNFNLLFFKIFNFFFCFSGPQ 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03842 138 MobiDBLite consensus disorder prediction 1 24 - -
Tsu07g03842 138 Gene3D Histone, subunit A 17 119 IPR009072 GO:0046982
Tsu07g03842 138 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-8 6 124 - -
Tsu07g03842 138 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 6 124 IPR027113 GO:0001228|GO:0006355|GO:0016602
Tsu07g03842 138 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Tsu07g03842 138 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Tsu07g03842 138 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Tsu07g03842 138 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Tsu07g03842 138 SUPERFAMILY Histone-fold 27 117 IPR009072 GO:0046982
Tsu07g03842 138 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03842 Tsu-Chr7 44617032 44618080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03842 7 116 CCAAT-HAP3 Transcription Factor Family AT2G37060 85.841 2.64e-67 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Tsu07g03842 CBFD_NFYB_HMF 4.6e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03842 K08065 - gmx:100798667 222.246