Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03841 ATGGAGACTTCCATACTCTTCTTCTACTCCTTTCTCGCACTCTCACTCTTTCTTCCTTTCTCCTCTTCTCAGATCATGCAAGGTTTTATAAGTTTGGATTGTGGAGGTACAGAAAGTTTCACTGATGaaattggtcttgaatggactACTGATAATAAGCTCAATTATGGAGAAACAAGCACTATATCGGTTGCGAATGAGACGAGAAAGCAATACAAGACGCTGCGACACTTTCCTGCGGATTCAAGGAAATATTGCTACGCGCTTGATGTTATCAGTAGGACAAGGTACCTACTAAGGGCCACTTTCTTGTATGGCAACTTCGACGAAAACAATGTTTATCCGAAGTTTGACGTTTCTGTTGGTGCTACACATTGGTCTACAATTGTTATTTCTGATGCTAACATTATAGAAACGAGAGAGCTTATATTTTTGGCTTCAAGTTCAACTGTTAGTGTATGTTTATCAAATGCAACAACTGGACAACCATTTATATCTACGCTTGAACTTCGACAATTCAACGgttcaatttattttacacAATATGAGCAACAATTTTACCTTAGTGTCTCTGCTAGGATCAATTTTGGTGCGGAGAGTGATGCTCCAATCAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCTGATTCTGTGAAGAAAGCAAATTATCTTGTTGATGTTGCTGCTGGAACTGAGAAAATTTCTACCAATGTACCAATTTTTGTTAACAGAGATGAAATGCCACCAATGAAAGTGATGCAGACAGCTGTAGTTGGTACAACTGGATCTCTAACTTACCGATTAAATTTGGATGATTTTCCTGGCAATGCTTGGGCAGTCACTTATTTTGCCGAGATTGAAGATTTGCGTCCAAACGAGTCTAGAAAATTCAGGCTTGTGCTTCCGGGCAAAGCTGATATTAGCAAGGCTATTGTaaatattgaagaaaatgcTCTAGGGAAATATCGTCTTTATGAACCAGGATTTACCAATTTAACCCTACCCTTTGTGCTTTCCTTTAAATTTGGAAAGACATCCGATTCATCCAAGGGACCTCTTTTAAATGCAATGGAGATAAATAAGTATCTTGAGAAAAATGAAGGTTCACCAGATGTTGCAGCTATTTCTGGAGTGCTTTCTCGCTACTCTTCAGCAAACTGGACACAAGAAGGAGGCGATCCATGTCTTCCTGTTCCGTGGTCATGGGTCCGCTGTAGCTCAGATTCACAACCAAgaataatttcaatCTCGTTATCTGGTAAAAACTTGACTGGGAATATTCCTTCAGATATTACCAAATTGGTCGGTCTGGTTGAACTATGGCTTGATGGAAATATGTTGACCGGCTCAATTCCAGATTTTACCGGGTGCACGGACTTAAAGATTATTCATCTTGAAAATAATCAGTTCACGGGTGTGCTCCCAGACTCTTTGGCGAATCTTCCGAGTTTGAAGGAACTATATGTTCAAAATAATATGTTATCTGGAACAGTGCCACCAAATCTTCTAAGCAAGGATTTGGTTTTAAACTACTCTGGAAACATTAATCTTCATAGAGGAAGCAAAATAAAGAGCCATATGTATATTATTATCGGTTCAGCAGTTGGTGCTTCTATTCTACTTTTGGCTACTGTTATATCTTGCTTGGTTATGCATAAAGGCAAGAGAAGGTATTATGAGAAAGACCACATAGTTTCGGTCCCTACTGAAAGGCCGGCTTCTTGGAAAAGTGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTAGCTGAAATTGAAAGTGCTACAAACAACTTTGAGAAAAGAATTGGTTCTGGTGGTTTTGGAATTGTATACTATGGGAAACTGAAAGAAGGAAAAGAGATAGCAGTTAAAGTTCTAAGGAATAATTCCTATCAAGGCAAGCGCGAGTTCTCAAATGAGGTGACTCTTCTATCAAGAATACATCACAGAAACTTGGTACAACTTCTTGGGTATTGCCGAGAAGAAGATAATAGTATACTTGTATATGAGTTCATGCATAATGGCACTCTCAAGGAACATCTTTATGGGTCTTTAGAGCATGGAAGGAGTATCAATTGGATTAAACGCCTTGAGATTGCAGAAGATGCTGCCAaagGAATTGAATACCTTCATACAGGTTGTGTTCCTGTAGTTATCCATAGAGACTTGAAAAGCAGCAATATTCTTCTTGACAGGCAGATGAAAGCCAAGGTTTCAGATTTTGGTCTTTCCAAACTTGCTGTTGATGGAGTCTCCCATGTTTCAAGTATAGTTCGCGGGACAGTAGGATACCTCGATCCTGAGTACTATATTTCCCAACAGCTAACTGACAAGAGTGATGTTTATAGCTTTGGTGTAATTCTTCTAGAACTCATATCCGGTCAAGAAGCAATATCAAATGAAAGTTTCGGTCTTCATTGTCGAAACATAGTCCAATGGGCCAAATTATACATCGAGAGTGGAGATATACAAGGCATTATTGATCCCTTGTTAGGTAACAAGTATGACCTACAATCAATGTGGAAAATAGCAGAAAAAGCATTGATGTGTGTTCAAGCTCACGGAGATATGCGACCATCAATTTCAGAAGTTTTAAAGGAGATCCAAGATGCAATATCTATCGAGAAAGAGGCTGAAACATTAAGAGAAGGCAATTCTGATGAGGCGTCGAGAAATTCTTTTCATTCTTCCATGAATATAGGTTCAATGGATCTTGGTAGAGCCGAAAGTTTCCTTTCAATCGATGAATCCATTGCACAGCCTACGGCAAGATAG 2784 0.3847 METSILFFYSFLALSLFLPFSSSQIMQGFISLDCGGTESFTDEIGLEWTTDNKLNYGETSTISVANETRKQYKTLRHFPADSRKYCYALDVISRTRYLLRATFLYGNFDENNVYPKFDVSVGATHWSTIVISDANIIETRELIFLASSSTVSVCLSNATTGQPFISTLELRQFNGSIYFTQYEQQFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTNVPIFVNRDEMPPMKVMQTAVVGTTGSLTYRLNLDDFPGNAWAVTYFAEIEDLRPNESRKFRLVLPGKADISKAIVNIEENALGKYRLYEPGFTNLTLPFVLSFKFGKTSDSSKGPLLNAMEINKYLEKNEGSPDVAAISGVLSRYSSANWTQEGGDPCLPVPWSWVRCSSDSQPRIISISLSGKNLTGNIPSDITKLVGLVELWLDGNMLTGSIPDFTGCTDLKIIHLENNQFTGVLPDSLANLPSLKELYVQNNMLSGTVPPNLLSKDLVLNYSGNINLHRGSKIKSHMYIIIGSAVGASILLLATVISCLVMHKGKRRYYEKDHIVSVPTERPASWKSDDPAEAAHCFSLAEIESATNNFEKRIGSGGFGIVYYGKLKEGKEIAVKVLRNNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEDNSILVYEFMHNGTLKEHLYGSLEHGRSINWIKRLEIAEDAAKGIEYLHTGCVPVVIHRDLKSSNILLDRQMKAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGLHCRNIVQWAKLYIESGDIQGIIDPLLGNKYDLQSMWKIAEKALMCVQAHGDMRPSISEVLKEIQDAISIEKEAETLREGNSDEASRNSFHSSMNIGSMDLGRAESFLSIDESIAQPTAR 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03841 927 SMART serkin_6 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03841 927 Pfam Protein tyrosine and serine/threonine kinase 601 801 IPR001245 GO:0004672|GO:0006468
Tsu07g03841 927 Pfam Leucine rich repeat 456 496 IPR001611 GO:0005515
Tsu07g03841 927 Gene3D Phosphorylase Kinase; domain 1 573 674 - -
Tsu07g03841 927 Gene3D Transferase(Phosphotransferase) domain 1 675 897 - -
Tsu07g03841 927 PANTHER TYROSINE KINASE DOMAIN PROTEIN 12 927 - -
Tsu07g03841 927 Pfam Malectin-like domain 32 362 IPR024788 -
Tsu07g03841 927 SUPERFAMILY L domain-like 400 514 - -
Tsu07g03841 927 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Tsu07g03841 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Tsu07g03841 927 ProSiteProfiles Protein kinase domain profile. 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03841 927 CDD STKc_IRAK 605 872 - -
Tsu07g03841 927 SUPERFAMILY Protein kinase-like (PK-like) 584 869 IPR011009 -
Tsu07g03841 927 PANTHER OS07G0107800 PROTEIN-RELATED 12 927 - -
Tsu07g03841 927 Gene3D Ribonuclease Inhibitor 375 529 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03841 Tsu-Chr7 44609825 44614776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03841 21 709 Receptor kinase-like Gene Family AT2G37050 67.241 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tsu07g03841 Malectin_like 9.1e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03841 - - gmx:100784017 1604.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03841 07 44609825 44614776 Tsu01g02490 01 27136590 27141922 PCT