Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03835 ATGGATATTGAAGAAGTAGAAAGAGTAGTTGTAGCAAAACCAGTTGCTTCAAGACCAAAATGTTCTACTTACAAATCTTTCTCAGAGCTTCTAGCAGGTGCAATCAATGACACTCCTCCAATTGTATCTTCTCAAACTACAATTTCTGCCATTAGACCAAAGACAGTGAGGTTCAAGCCAACATTGAATCTCCCCCATGCTGGATCTATTTCTTCTCAGTCTGACATGGATCCCAAACTCGACACCAATCAGTCTCTCATTTACAAGCCAACGGCAAAATTTGTGTCAAAGACAACCGTCTCTCTCTTGGCAAACATGGAAATTTGCAATACTAATCAGCAACAATCACGGCAATCAGTGGAGAACAATCTTCAACATCTAAACCATGACACGTTTAGATCGAATATGAGCTCAAATTTTCATCAGAACATTACCCTTCCAAAAGAAACATACCAGCAGGTCACTGAACCTTGTAAGACGGCACAACAGAACATGGAAGAGGACCAAAAAGCTTTAACACCATCCACAATGAATGCTGATAGACCTTCTTATGATGGATATAACTGGAGAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTATTACAAGTGTACACATCCTAACTGTCCAGTTAAAAAGAAAGTTGAAAGATCATTTGATGGTGAGATTGCAGAAATTGTTTATAAAGGTGAACACAATCATGGAAAGCCGCAACTTCAAAAGCGCAATGGGGGAGCGGCACAAGGATCAGGAATGATTTCTGATGGATTGGTTCAAGATATGGAGAACCAGAATCAGAATGAAAGGATTGAAGGAAGAATGGAGAATCATATCAAAGCTTCACAGCCTAATGATTTTGCTCTAGAAAATTCATGTGAAGAAGGAAGCAAAGGATTTGAAGCAGAGGAAGATGATCCTAGAAGTAAAAGAAGGAAAAATGAGAATCGATCCAATGAAGGGGCAGTATCAGAGGAAGGTTTAGTAGAGCCACGCATCGTGATGCAAAATTCTGCGGATTCTGAAATCGTTGGAGACGGCTTTCGCTGGAGGAAATATGGACAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTACTATAGATGTACCAGTATCAAGTGTAACGTTCGCAAACATGTGGAAAGGTCAATAGACGATCCAAAATCATTTGTGACTACATATGAAGGAAAACACAACCATGAGATGCCACTCAAGAACACAACAGCAACTGTGTCTTCTGAAAAAGATTCACAGGCTTCTCTTAGTAAAGATAAACCATACTGA 1299 0.3988 MDIEEVERVVVAKPVASRPKCSTYKSFSELLAGAINDTPPIVSSQTTISAIRPKTVRFKPTLNLPHAGSISSQSDMDPKLDTNQSLIYKPTAKFVSKTTVSLLANMEICNTNQQQSRQSVENNLQHLNHDTFRSNMSSNFHQNITLPKETYQQVTEPCKTAQQNMEEDQKALTPSTMNADRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGEIAEIVYKGEHNHGKPQLQKRNGGAAQGSGMISDGLVQDMENQNQNERIEGRMENHIKASQPNDFALENSCEEGSKGFEAEEDDPRSKRRKNENRSNEGAVSEEGLVEPRIVMQNSADSEIVGDGFRWRKYGQKVVKGNPYPRSYYRCTSIKCNVRKHVERSIDDPKSFVTTYEGKHNHEMPLKNTTATVSSEKDSQASLSKDKPY 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03835 432 MobiDBLite consensus disorder prediction 234 258 - -
Tsu07g03835 432 MobiDBLite consensus disorder prediction 301 332 - -
Tsu07g03835 432 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 411 IPR044810 GO:0003700
Tsu07g03835 432 SUPERFAMILY WRKY DNA-binding domain 343 408 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g03835 432 Coils Coil 110 130 - -
Tsu07g03835 432 MobiDBLite consensus disorder prediction 301 324 - -
Tsu07g03835 432 SUPERFAMILY WRKY DNA-binding domain 180 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g03835 432 Pfam WRKY DNA -binding domain 185 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g03835 432 Pfam WRKY DNA -binding domain 350 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g03835 432 PANTHER WRKY TRANSCRIPTION FACTOR 44 7 411 - -
Tsu07g03835 432 ProSiteProfiles WRKY domain profile. 343 408 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g03835 432 MobiDBLite consensus disorder prediction 408 422 - -
Tsu07g03835 432 SMART WRKY_cls 183 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g03835 432 SMART WRKY_cls 348 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g03835 432 ProSiteProfiles WRKY domain profile. 185 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g03835 432 MobiDBLite consensus disorder prediction 399 432 - -
Tsu07g03835 432 Gene3D WRKY domain 333 409 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g03835 432 Gene3D WRKY domain 169 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03835 Tsu-Chr7 44561247 44565383 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03835 77 409 WRKY Transcription Factor Family AT2G37260 43.956 1.20e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g03835 WRKY 3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03835 - - gmx:100794069 625.55