Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03834 ATGGGTTGGATTCCATGTTCTGGAAATTCaggaacaaagaagaagattgtgAAGAAGATGGAAGTTCAAGATAGTCTCACTCGTCAAATTAAAGCTTCTCCTGCTCAAGGGAAATTGAAGAGGAGTTCATCAACAAGTTCCAAGGATACATCCAAACATGGGAACAATGAACACATTGCAGCACAAACATTCTCATTCCGCGAGTTGGCAATTGCAACTAGAAATTTTAGAGCTGAATGTCTTTTGGGGGAAGGAGGCTTTGGTAGAGTATACAAAGGGCATCTCGAAAGTATTAATCagGCTGTCGCAATCAAGCAACTTGACCGAAACGGACTCCAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCATCCTAACCTTGTAAACCTTATCGGTTATTGTGCTGATGGAGATCAGAGGCTTCTAGTTTATGAATATATGTCATTAGGATCCTTGGAAGACCACTTGCATGATTTATCTCCTAGCAAGAAACGACTTGACTGGAACATGCGAATGAAAATAGCCGCCGGGGCTGCGAAGGGATTGGAGTATCTACACGACAAAGCCAATCCTCCGGTCATATACCGAGATTTGAAATGCTCCAACATTTTGCTTGGTGAAGGGTATCACCCCAAGTTATCTGATTTTGGCTTGGCCAAACTTGGCCCGGTCGGAGAAAACACCCATGTATCGACAAGGGTTATGGGCACCTATGGATATTGTGCTCCAGAGTATGCAATGACCGGTCAACTTACTCTCAAATCAGATGTTTATAGCTTTGGTGTAGTTCTTCTCGAAATAATCACAGGAAGGAAAGCTATTGACAATTCGAAATCTGCGGCAGAGCAGAATCTTGTTGCATGGGCTAGACCGTTGTTCAAAGATCGAAGGAAATTTTCGCAAATGGCTGATCCTGTGCTTCAAGGTCAGTATCCTTCGAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAAGAACAAGCTAATATGCGTCCGGTTATAGCTGATGTTGTCACAGCTTTGTCTTACCTTGCTTCGCAAAGACATGATCACAATACGCAGACAGTCCAAAACTCTCGCCTCTCTCCTGGTACTCCCTCTAGAACCAGGAGGGGCCGATGA 1149 0.4326 MGWIPCSGNSGTKKKIVKKMEVQDSLTRQIKASPAQGKLKRSSSTSSKDTSKHGNNEHIAAQTFSFRELAIATRNFRAECLLGEGGFGRVYKGHLESINQAVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMSLGSLEDHLHDLSPSKKRLDWNMRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAAEQNLVAWARPLFKDRRKFSQMADPVLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRHDHNTQTVQNSRLSPGTPSRTRRGR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03834 382 MobiDBLite consensus disorder prediction 25 57 - -
Tsu07g03834 382 MobiDBLite consensus disorder prediction 358 375 - -
Tsu07g03834 382 Pfam Protein tyrosine and serine/threonine kinase 80 347 IPR001245 GO:0004672|GO:0006468
Tsu07g03834 382 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Tsu07g03834 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Tsu07g03834 382 Gene3D Transferase(Phosphotransferase) domain 1 153 373 - -
Tsu07g03834 382 CDD STKc_IRAK 82 350 - -
Tsu07g03834 382 SUPERFAMILY Protein kinase-like (PK-like) 62 364 IPR011009 -
Tsu07g03834 382 PANTHER OS07G0668900 PROTEIN 1 380 - -
Tsu07g03834 382 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03834 382 Gene3D Phosphorylase Kinase; domain 1 45 152 - -
Tsu07g03834 382 PIRSF ILK 12 368 - -
Tsu07g03834 382 MobiDBLite consensus disorder prediction 358 382 - -
Tsu07g03834 382 MobiDBLite consensus disorder prediction 26 44 - -
Tsu07g03834 382 SMART serkin_6 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03834 382 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03834 Tsu-Chr7 44552968 44555684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03834 31 355 Glycoside Hydrolase AT3G07070 67.692 1.26e-164 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tsu07g03834 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03834 - - gmx:100818024 676.781