Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03824 ATGCTTCCTTTCTTCAACCAAACTATGGAGCTAGTTTCCAATCCCATAAGAACTCGAAACCATCCCTCTCCGACACTCGGAGAACTCCTCAAACGAGTCGAAGATGCTCAAAACGACAACAATATTGCCGATGAACCTCACCATATTCTCGACGTTTCTTCCTCGTCCTCCTCTTCCACCACCCTTCCCCCgccttttttcctttctttcacCAACTTAACTTACAGCGTCAAGCTCAAAAGTAAGGTTTCTTGCTTTTCCTCAAAACAAAATTCTCTTTCAACCGATCCAGAAGCCGAAACAAATCCAACCGGTACAAAGATTCTCCTCAACGACATATCCGGTGAAACCAGGGACGGCGAGATCATGGCAGTTCTCGGCGCAAGTGGCTCCGGCAAGTCAACACTAATCGACGCACTAGCCGATAGAATTTCCAAAGAGTCTCTCAAAGGTACGGTGACACTAAACGGCGACGTTTTGGAGTCAAGTCTTCAGAAGGTAATTTCAGCTTATGTTATGCAAGATGATCTTCTCTTCCCCATGCTTACGGTGGAGGAAACTCTCATGTTCTCGGCTGAGTTTCGCCTCCCTCGTTCTCTctcaaaatcaaagaaaaaggCCCGTGTTCAAGCGCTCATCGATCAGCTCGGTCTTCGAAATGCAGCCACAACGGTCATCGGAGACGAAGGACACCGCGGTGTTTCCGGTGGAGAACGCCGCCGTGTCTCAATCGGAACAGACATAATTCACGATCCAATCATTTTATTCTTAGATGAACCAACATCTGGACTTGACTCCACCAGTGCTTACATGGTGGTGAAGGTTTTGCAGCGAATTGCTCAGAGCGGTAGCATCGTGATAATGTCCGTTCATCAACCAAGCTACAGAATCCTTGGTTTGTTAGACCGTTTGATCTTCCTCTCCCATGGTCAAACCGTCTACAGCGGTTCTCCGGTGAACCTCCCTAATTTCTTCTCCGAGTTCGGTCATCCGATACCGGGAAACGAGAACCGAACAGAATTCGCGTTAGATCTGATCCGTGAACTTGAAGAAACTCCCGGCGGAACCAAAAGTCTCGTTGAGTTCAACAAATCATGGCAGTTAAAAAATCAACCACCGTCTGCAACCGCCGTTAGTAATAACGGACCGAAACTATCTTTAAAAGACGCCATCAGCGCAAGTATCTCAAGAGGAAAATTAGTTTCAGGTACTAACGGCGGTAACGGAAATGGAAACGGAAACTCAACTGCATCATCAGTTGCCACGTTTGCAAATCCATTTTGGATTGAAATGGCTGTTATTGGAAAAAGATCTCTAACAAACTCAAGGCGGATGCCGGAAATATTCGGAATCCGTCTCGGTGCAGTTCTGGTCACCGGAGGAATTTTAGCCACCATGTTCTACCATCTTGACAATTCACCAAAAGGTGTTAAAGAGAGATTAGGATTTTTCGCATTCGCCATGTCAACAACCTTCTACACTTGTGCTGAAGCACTTCCAGTATTCCTTCAAGAACGTTACATCTTCATGAGAGAAACTGCTTACAATGCTTACCGTCGATCTTCTTATGTCCTTGCTCATTCCATCATCTCCCTTCCTGCACTGATCTTCCTTTCATTCACCTTCGCCGCCACTACTTTCTGGTCGGTCGGACTAGCCGGCGGTTCAGCTGGTTTTCTCTTTTACTTTTTAACAATCTTAGCTTCCTTTTGGGCTGGTAGTTCCTTCGTGACATTCCTCTCTGGCGTAGTTTCTCATGTGATGCTTGGTTTTACCGTTGTGGTTGCAATTTTGGCTTACTTTCTCCTATTCAGTGGATTCTTTATCAGTAGGGATAGGATTCCACCTTATTGGATATGGTTCCATTATTTATCACTAGTAAAATATCCTTTTGAGGGAGTGCTTCAGAATGAGTTTGATATTAAGCCACCAAGATGTTTTGTGAGAGGGATTCAGATGTTTGATAACACGCCGCTCGACGATTTTCCGGGGAGTGTGAAAGTGGAGTTGTTGAAGAGTATGAGTAAGACATTAGGGATTAACATAACAAGCTCTACTTGTGTTGTTAATGGAGCTGCTGTATTGAAGCAGCAGGGTGTTACACAACTTAGTAAATGGAACTGCTTGTTCATTACCATTGCTTGGGGTTTCTTCTTTCGTTTCCTATTTTACTTGGCATTGCTGTTTGGAAGCAAGAACAAGAGGAAATAA 2211 0.4419 MLPFFNQTMELVSNPIRTRNHPSPTLGELLKRVEDAQNDNNIADEPHHILDVSSSSSSSTTLPPPFFLSFTNLTYSVKLKSKVSCFSSKQNSLSTDPEAETNPTGTKILLNDISGETRDGEIMAVLGASGSGKSTLIDALADRISKESLKGTVTLNGDVLESSLQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSKKKARVQALIDQLGLRNAATTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSVHQPSYRILGLLDRLIFLSHGQTVYSGSPVNLPNFFSEFGHPIPGNENRTEFALDLIRELEETPGGTKSLVEFNKSWQLKNQPPSATAVSNNGPKLSLKDAISASISRGKLVSGTNGGNGNGNGNSTASSVATFANPFWIEMAVIGKRSLTNSRRMPEIFGIRLGAVLVTGGILATMFYHLDNSPKGVKERLGFFAFAMSTTFYTCAEALPVFLQERYIFMRETAYNAYRRSSYVLAHSIISLPALIFLSFTFAATTFWSVGLAGGSAGFLFYFLTILASFWAGSSFVTFLSGVVSHVMLGFTVVVAILAYFLLFSGFFISRDRIPPYWIWFHYLSLVKYPFEGVLQNEFDIKPPRCFVRGIQMFDNTPLDDFPGSVKVELLKSMSKTLGINITSSTCVVNGAAVLKQQGVTQLSKWNCLFITIAWGFFFRFLFYLALLFGSKNKRK 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03824 736 Pfam ABC transporter 110 262 IPR003439 GO:0005524
Tsu07g03824 736 ProSitePatterns ABC transporters family signature. 234 248 IPR017871 GO:0005524
Tsu07g03824 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 729 - -
Tsu07g03824 736 Pfam ABC-2 type transporter 433 639 IPR013525 GO:0016020|GO:0140359
Tsu07g03824 736 SMART AAA_5 119 311 IPR003593 -
Tsu07g03824 736 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 93 334 IPR003439 GO:0005524
Tsu07g03824 736 Pfam ABC-2 type transporter 291 377 IPR043926 GO:0140359
Tsu07g03824 736 Gene3D - 101 325 IPR027417 -
Tsu07g03824 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 23 729 - -
Tsu07g03824 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03824 Tsu-Chr7 44456155 44458365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03824 109 294 Calmodulin-binding Proteins AT2G36910 29.630 9.08e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03824 K05681 - gmx:100803426 1120.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03824 07 44456155 44458365 Tsu07g03824 07 44456155 44458365 ECH