Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03819 ATGACTATATCTTGCTGGAAACCAACTGTGGAAGGTGATGATGGTGATGTGAAAGGGAAAATTGATGGATTGTTATGGTATAAGGATTTGGGGAACCATCTTTATGGTGAATTTTCAATGGCTGTTATTCAAGCTAATAGTTCATTGGAGGATCGTAGTCAATTTGAATCTGGACCCTTAAGTTCTGATTATTTGGGTCCTCAAGGAACCTTTTTTGGTGTATATGATGGTCATGGTGGTACTGCAGCTGCTCAGTTTGTCAATGATAATCTATTCTCCAATTTCAAGAGTTTTGCAGCTGAAGATCAAGGTGTTTCGGAAAAGGTTATAAGAAGAGCATTTTCGGCAACAGATGATGGTTTTCTGTCTCTTGTAAAGAAGCAGTGGCTAACCAAGCCACAGATAGCATCAGCTGGTACATGTTGTTTGGCGGGGATAATTTGCAATGGATTGTTGTATATTGCAAATGCTGGAGATTCAAGAGCGGTGTTAGGAAGAGCGAGGAGGGGAACAAGAGAAACCTCAGCTATTCAGTTATCAGTAGAACACAATGTTAACATCGATACTGAGAGAGATGATGTTCGGTCGAAGCACCCCTACGATTCACAGATTGTGGTTATGAAACACTCAGTTTGGCGTGTTAAAGGCATCATACAGGTTTCAAGATCCATAGGTGATGCATATCTAAAGAAAGCAGAATTTAACAGGGAGCCTCTGCCGCTTAAGTTCAGACTACCTGAAACCTTTTTCAAGCCAATTCTTAGTAGCGAGCCATCGATAtcagttcataaaatacaaccTGAAGATCAATTTCTCATCTTAGCTTCTGATGGTTTATGGGAGCATCTTAGCAACCAAACAGCTGTCAATATCGTTAGCAATAGTCCGCGCAATGGAATAGCGAGGAGACTTGTTAAAGCAGCACTCAAAGAAGCAGCTAAGAAAAGAGAAATAAGATTCTCAGACCTACAAAAGATTGAACAAGGAGTGAGGAGACACTTCCATGATGATATTACAGTAATTGTTGTATATCTAAATCCGAAACTGATTGATAATAGCCCTCAATGTATTTCGCCTCTTTCGATCAAAGACCGTAGGCATGTCAATTCTTAg 1113 0.3944 MTISCWKPTVEGDDGDVKGKIDGLLWYKDLGNHLYGEFSMAVIQANSSLEDRSQFESGPLSSDYLGPQGTFFGVYDGHGGTAAAQFVNDNLFSNFKSFAAEDQGVSEKVIRRAFSATDDGFLSLVKKQWLTKPQIASAGTCCLAGIICNGLLYIANAGDSRAVLGRARRGTRETSAIQLSVEHNVNIDTERDDVRSKHPYDSQIVVMKHSVWRVKGIIQVSRSIGDAYLKKAEFNREPLPLKFRLPETFFKPILSSEPSISVHKIQPEDQFLILASDGLWEHLSNQTAVNIVSNSPRNGIARRLVKAALKEAAKKREIRFSDLQKIEQGVRRHFHDDITVIVVYLNPKLIDNSPQCISPLSIKDRRHVNS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03819 370 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 364 - -
Tsu07g03819 370 Pfam Protein phosphatase 2C 67 314 IPR001932 -
Tsu07g03819 370 PANTHER ALPHABET, ISOFORM E-RELATED 3 364 - -
Tsu07g03819 370 SMART PP2C_4 31 343 IPR001932 -
Tsu07g03819 370 Gene3D - 28 354 IPR036457 -
Tsu07g03819 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Tsu07g03819 370 CDD PP2Cc 35 345 IPR001932 -
Tsu07g03819 370 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Tsu07g03819 370 SUPERFAMILY PP2C-like 46 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03819 Tsu-Chr7 44424298 44427388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03819 1 362 PP2C-type Phosphatase Gene Family AT3G12620 65.753 3.44e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03819 K01102 - gmx:100815902 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03819 07 44424298 44427388 Tsu07g03819 07 44424298 44427388 ECH