Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03804 ATGGGATATTGTAACCAAAAAACGTATGAAATTTGGAAACCATTCATAGCTGTTGTGTTCTTGCAATTTGGATATGCTGGTATGGATATTCTATCCAAAGCTGCACTCAACAAAGGAATGAGCAATTATGTACTCGTCGTTTATCGTCACGCCGTTGCCTTCATTGTGATTGTTCCTTTTGCAGTCATCTTAGAAAAgAAAGTGAGGCCAAAGatgacattttcaatctttaTGAAGCTAGTGATTCTCAGTGTGCTAGAGCCAGTGATtgatcaaaatttatattttttgggaATGAAGTATACAACAGCTACTTTTGCAGTTGCTATGTTCAATGTCCTTCCTGCCATTACCTTTGTGGTGGCTTGGATTCTCAAGCTTGAgaagataaaaatgaaaagtgtACATAGTCAAGCAAAGATTGTTGGGACAATAGCCACTGTTGTAGGTGCCATGCTTATGACATTGTTAAAAGGTCCAATCCTTAATATTTTTGGAATACATGGAAGCAGTGATCAAATCCAACATAATAGTGGTGCAAATCTTCAACATGCAATAAAGGGTTCAATTATGATCACAATTGGTTGTTTTAGTTGTGCTTGTTTCATGATTCTCCAAGCTATAACACTTGAAACATATCCAGCTGAGTTATCTCTTACAGCATGGATATGTCTATTGGGAACAATAGAAGGTGGAATAGTAGCTTTGATTATGGAAAGGGGTGAACCTTCAGTTTGGTCTTTGAATTGGGATACAAAACTGTTGGCTGCAGTTTATAGTGGTATAGTTTGTTCAGGAATGGCCTATTACATTCAAGGAGCAGTGATGAGATATAGAGGTCCAGTCTTTGTAACAACTTTCAATCCTCTCTGCATGGTCATTGTAGCTATCATGGGCTCCTTCTTTTTAGCCGAGAAAATTTACCTCGGAAGGGTGATCGGCGCTGTCGTGATTATTTTTGGATTGTATTTAGTGGTATGGGGTAAAAGTAAAGATTATGACACACCAAATCCAAATATTGAAGATGAAATATTACCATCTAAGCAAATTACAGAGATTAATGACAAAGAGGAGCATCCTAATCATGAGGTCATGATCACTAGCAAAAATATTGGTGAAGGAAATAACATAGCAAGAGATGAACAAGTGTGA 1152 0.3585 MGYCNQKTYEIWKPFIAVVFLQFGYAGMDILSKAALNKGMSNYVLVVYRHAVAFIVIVPFAVILEKKVRPKMTFSIFMKLVILSVLEPVIDQNLYFLGMKYTTATFAVAMFNVLPAITFVVAWILKLEKIKMKSVHSQAKIVGTIATVVGAMLMTLLKGPILNIFGIHGSSDQIQHNSGANLQHAIKGSIMITIGCFSCACFMILQAITLETYPAELSLTAWICLLGTIEGGIVALIMERGEPSVWSLNWDTKLLAAVYSGIVCSGMAYYIQGAVMRYRGPVFVTTFNPLCMVIVAIMGSFFLAEKIYLGRVIGAVVIIFGLYLVVWGKSKDYDTPNPNIEDEILPSKQITEINDKEEHPNHEVMITSKNIGEGNNIARDEQV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03804 383 Pfam EamA-like transporter family 16 154 IPR000620 GO:0016020|GO:0016021
Tsu07g03804 383 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Tsu07g03804 383 PANTHER WAT1-RELATED PROTEIN 9 353 - -
Tsu07g03804 383 PANTHER WAT1-RELATED PROTEIN 9 353 IPR030184 GO:0016021|GO:0022857
Tsu07g03804 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 331 - -
Tsu07g03804 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03804 Tsu-Chr7 44317950 44320933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03804 10 378 Nodulin-like Gene Family AT2G37460 63.342 1.66e-167 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03804 - - gmx:100806461 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03804 07 44317950 44320933 Tsu01g02537 01 27981717 27990038 PCT