Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03792 ATGGCGGCGGCACGGCGACTCCGTGAGCTTCAATCAGAACAATCAAACAAGATCTGCGTCGACTGTTCTCAAAAGAATCCACAATGGGCTTCCGTTTCCTACGGAATTTTCATGTGTCTAGAATGTTCCGGAAAACACCGTGGCCTCGGCGTTCATATCTCCTTCGTCCGATCTGTAACCATGGATTCATGGTCCGATCTCCAGATCAAGAAAATGGAAGCAGGAGGTAACCGTAATCTCAATTCATTCCTCGCTCAATACGGAATCTCTAAGGAAACTGATATAGTTACTAAGTATAATTCAAACGCTGCTTCAATTTATCGCGATCGGATTCAAGCTCTTGCTGAAGGTCGTTCATGGCGGGATCCACCTGTCGTTAAGGAGAATTCGAATGCGAGTACTCGTCCTGGAAAAGGGAAGCCTCCTCTGGCTTCGTCGAATGGAAATGGTTGGGATGATAATTGGGATAATGATGATAGTTATGGATCTCGTGCTGATATTAGGAGGAATCAGAGTACTGGTGATGTTATGGGatttgttggtggtggtggtgttacGCCGTCGAGGTCTAAATCGACGGAGGATATTTATACGAGGACACAATTGGAAGCTTCTGCTGCTAATAAGGAAGGATTTTTTGCGAGGAAGATGGCGGAGAATGAATCGCGGCCAGAGGGACTTCCGCCTTCTCAGGGTGGGAAGTATGTTGGGTTTGGATCTAGTCCTGGTCCTGCTCAGAGGATATCTCCTCAAAATGATTATTTATCTGTTGTTTCTGAggGAATTGGTAAATTATCGATGGTTGCTCAATCTGCAACCAAGGAGATCACTGCCAAGGTAAAGGATGGCGGTTATGATCACAAGGTCAATGAAACTGTCAATATTGTCACTCAGAAGACATCGGAGATTGGACACAGGACATGGGGTATAATGAAAGGGGTCATGGCATTGGCCACACAAAAGGTTGAGGAACTCACCAAAGATTACCCGAATGGGAATTCTGATAACTGGcaacaaaatgaaaatgatagaCATGATTTCAATCAAGATAATAAAAGCTGGAATTCTTCTACTAGAGAAGGACAACCTTCATCAGGTGGACAAAGTAATACTTACCAATCAAACTCTTGGGATGATTGGGACAATCAAGATACAAGGAAGGAAGTACCAGCTAAAGGCTCAGCTCCTCATAAGAATGATGATTGGGCTGGTTGGGATGATGCCaaggatgatgatgaatatgATAATAAATCTTCTGGTCATAATGGGACGTCAGGTACTGGCTGGACAGGAGGAGGCTTTCACTAA 1308 0.4251 MAAARRLRELQSEQSNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSDLQIKKMEAGGNRNLNSFLAQYGISKETDIVTKYNSNAASIYRDRIQALAEGRSWRDPPVVKENSNASTRPGKGKPPLASSNGNGWDDNWDNDDSYGSRADIRRNQSTGDVMGFVGGGGVTPSRSKSTEDIYTRTQLEASAANKEGFFARKMAENESRPEGLPPSQGGKYVGFGSSPGPAQRISPQNDYLSVVSEGIGKLSMVAQSATKEITAKVKDGGYDHKVNETVNIVTQKTSEIGHRTWGIMKGVMALATQKVEELTKDYPNGNSDNWQQNENDRHDFNQDNKSWNSSTREGQPSSGGQSNTYQSNSWDDWDNQDTRKEVPAKGSAPHKNDDWAGWDDAKDDDEYDNKSSGHNGTSGTGWTGGGFH 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03792 435 MobiDBLite consensus disorder prediction 327 435 - -
Tsu07g03792 435 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Tsu07g03792 435 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Tsu07g03792 435 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Tsu07g03792 435 MobiDBLite consensus disorder prediction 118 194 - -
Tsu07g03792 435 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 434 IPR044519 GO:0005096|GO:0016192
Tsu07g03792 435 CDD ArfGap_ArfGap1 3 117 - -
Tsu07g03792 435 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Tsu07g03792 435 SUPERFAMILY ArfGap/RecO-like zinc finger 5 114 IPR037278 -
Tsu07g03792 435 MobiDBLite consensus disorder prediction 351 379 - -
Tsu07g03792 435 Gene3D Arf GTPase activating protein 1 134 IPR038508 -
Tsu07g03792 435 SMART arf_gap_3 4 120 IPR001164 GO:0005096
Tsu07g03792 435 MobiDBLite consensus disorder prediction 380 418 - -
Tsu07g03792 435 Pfam Putative GTPase activating protein for Arf 5 101 IPR001164 GO:0005096
Tsu07g03792 435 MobiDBLite consensus disorder prediction 219 249 - -
Tsu07g03792 435 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03792 Tsu-Chr7 44165575 44171038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03792 5 87 C2H2 Transcription Factor Family AT4G21160 47.619 6.73e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03792 K12492 - gmx:100778302 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03792 07 44165575 44171038 Tsu07g03792 07 44165575 44171038 ECH
Tsu07g03792 07 44165575 44171038 Tsu01g02554 01 28276685 28280463 PCT