Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03768 atggagaatttatttcgCCTAGCGGATCGCGAAGACTTTTTCTCACGCCGTTGCATTTGGGTCAATGGACCTGTGATCATAGGCGCAGGTCCATCTGGTCTAGCAACGGCAGCATGTCTTAGAGAACAAGGAGTACCTTTCGTTGTTCTCGAAAGAGCTGATTGTATAGCATCACTATGGCAAAAAAGAGCATATGATAGATTAAAACTTCATCTCCCAAAACAATTCTGTCAACTACCTAACCTTCCATTCCCAGATGATTTCCCTGAATACCCTTCAAAGAAACaattcataaactaccttgaaactTATGCTAACAAATTCGACATCAACCCGAAATTCAATGAGTGTGTTCAATCTGCTAAATATGATGAAACAAGTGGATTGTGGAGAGTTAAAACCAATGAAGTTGAGTATATTTGTAGGTGGTTAGTTGTTGCTACCGGCGAAAATGCCGAGTGTATTACTCCTGAAATTGAAGGACTTTCTGAATTCAAAGGTGAAGTTGTTCATGCTTCTGATTACAAGTCAGGTGAAAATTTTACAGGAAAGAAAGTTCTTGTTGTTGGATGTGGAAATTCTGGAATGGAACTCTCACTTGATCTTAGCAATCACCATGCTTTACCTTCAATGGTCGTTCGCAGCTCGGTTCATGTCTTACCAAGAGAAATATTTGGAATATCAACTTTTCAATTAGCAGTTATGATGCTAAAATGGTTACCACTATGGATTGTCGACAAGCTTCTATTGATCTTGACATGGTTTATTTTGGGTGATATGGAAAAATATGGTATCAAAAGACCTTCAATGGGTCCTTTACAATTGAAGAACACAGAAGGAAAAACACCAGTGTTGAATATTGGTACTCTGGAGAAAATTAGATCCGGTGATATAAACGTTGTTCCTGGAATCAAGAGATTTAACAATAATGGTGAAGTTGAACTTGTTAATGGTGAAAAGCTTGATATTGATGCTGTTGTTCTTGCTACTGGCTACCGCAGTAATGTCCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCCAAGAATGGATACCCAAAAATGCCATTTCCACATGGATGGAAAGGAAATTCAGGACTATATGCAGTAGGGTTCACAAAGAGAGGGCTTTCTGGTGCTTCATCTGATGCTGTTAAAATTGCACAAGATATTGGAAAAGTTTGGAAACATGagacaaaacaaaagaaacaacgTACTACTGCTTGTCATAGACGTTGCATTTCACAATTCTAA 1251 0.3693 MENLFRLADREDFFSRRCIWVNGPVIIGAGPSGLATAACLREQGVPFVVLERADCIASLWQKRAYDRLKLHLPKQFCQLPNLPFPDDFPEYPSKKQFINYLETYANKFDINPKFNECVQSAKYDETSGLWRVKTNEVEYICRWLVVATGENAECITPEIEGLSEFKGEVVHASDYKSGENFTGKKVLVVGCGNSGMELSLDLSNHHALPSMVVRSSVHVLPREIFGISTFQLAVMMLKWLPLWIVDKLLLILTWFILGDMEKYGIKRPSMGPLQLKNTEGKTPVLNIGTLEKIRSGDINVVPGIKRFNNNGEVELVNGEKLDIDAVVLATGYRSNVPSWLQEGEFFSKNGYPKMPFPHGWKGNSGLYAVGFTKRGLSGASSDAVKIAQDIGKVWKHETKQKKQRTTACHRRCISQF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03768 416 SUPERFAMILY FAD/NAD(P)-binding domain 25 287 IPR036188 -
Tsu07g03768 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 185 203 - -
Tsu07g03768 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 141 159 - -
Tsu07g03768 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Tsu07g03768 416 Gene3D - 23 402 IPR036188 -
Tsu07g03768 416 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 414 - -
Tsu07g03768 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 181 205 - -
Tsu07g03768 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Tsu07g03768 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 142 150 - -
Tsu07g03768 416 Pfam Flavin-binding monooxygenase-like 26 337 IPR020946 GO:0004499|GO:0050660|GO:0050661
Tsu07g03768 416 SUPERFAMILY FAD/NAD(P)-binding domain 183 394 IPR036188 -
Tsu07g03768 416 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 10 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03768 Tsu-Chr7 43932875 43934859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03768 K11816 - gmx:100819987 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03768 07 43932875 43934859 Tsu07g03768 07 43932875 43934859 ECH
Tsu01g03414 01 42188049 42196597 Tsu07g03768 07 43932875 43934859 PCT