Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03756 ATGACCTCTTTCACTTGTTCCGCCTCTGACCTTCATGCACTCCTCGGCAGCAGTGGAAACTCCACAGCCGCTGCCGATTATATCTGCAACGGCTTTAATGCTGTTGCAAACAAATTCATTGACACAACCTATGCCATTGACAACACTTACCTTCTTTTCTCCGCTTACCTTGTTTTCGCAATGCAACTTGGTTTTGCAATGCTTTGTGCCGGTTCCGTTCGTGCCAAAAATACCATGAATATTATGTTAACAAATGTCCTTGATGCCGCGACCGGTGgcatatttttctatattttcgGGTTTGCTTTTGCTTTTGGCACACCTTCTAACGGTTTCATTGGAAAACATTTTTTCGGTCTTAGCGATTTTCCTTCTCAGTCTTTTGATTACGGATATTTTCTGTATCAATGGGCATTCGCAATCGCTGCAGCAGGAATCACGAGTGGATCAATTGCGGAACGAACACAGTTTGTTTCGTATTTGATCTACTCGTCCTTTTTAACCGGATTAGTTTATCCAATTGTTGCTCATTGGTTTTGGTCTGCTGATGGTTGGGGTAGTCCTGCTAGATCAGATAATCTTTTGTTCGGTTCCGGTGTTATCGATTTCGCAGGCTGTGGCGTCGTTCATTTGGTTGGTGCTGTTGCTGGTTTTTGGGGTGCTTTGATTGAAGGACCAAGAATTGGTAGATTTGATCATGAAGGTAGACCAGTTTCTTTGAGAGGACATAGTGGTACCTTAGTTGTTATGGGAACATTTTTACTTTGGTTCGGTTGGTACGGTTTTAACcccggttcttttctcaacatTTTGAAAACTTATGGTGAAAGTGGTAATTACTACGGTCAATGGAGCGCGATCGGGAGGACAGCTGTGACAACTACATTAGCCGGTTGCACGGCCGCCCTCACAACATTATTTGGTAAACGTATGCAAACCGGTCATTGGAATGTGACCGATGTTTGTAACGGTTTATTAGGCGGTTTTGCTGCTATAACCGCAGGGTGTTCTGTTGTGGATCCGTGGGCCGCAATTATCTGCGGATTTGTTGCTGCTTGGGTCTTAATTGGATGCAATATTTTAGCTGAGAAATTTTACTATGATGATCCTCTTGAAGCTGCACAACTTCATGGTGGTTGTGGAACTTGGGGGATAATTTTCACTGCCTTGTTTGCTAAGAAACAATATGTGAATGAAGTTTATGGTGGCTCAACTAATAGGCCTTATGGTTTGTTTTTGGGAGGTGGTGGAAGATTATTGGCTGCACATTTGGTTCAAATTGTGGCTATTGTTGCTTGGGTGAGTGTTACTATGGGAACAATGTTTTATGTTCTTCATAAGTTGAATTTGCTTAGGATTTCAGCTGAGGAAGAAATGGCTGGTTTGGATTTAACTAGTCATGGTGGAATGGCTTATGAGTATCATGATGAAGTTCAAGAACATTCCAAGAAACGTGCAATTCAAGTATGA 1470 0.4136 MTSFTCSASDLHALLGSSGNSTAAADYICNGFNAVANKFIDTTYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFFYIFGFAFAFGTPSNGFIGKHFFGLSDFPSQSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPIVAHWFWSADGWGSPARSDNLLFGSGVIDFAGCGVVHLVGAVAGFWGALIEGPRIGRFDHEGRPVSLRGHSGTLVVMGTFLLWFGWYGFNPGSFLNILKTYGESGNYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRMQTGHWNVTDVCNGLLGGFAAITAGCSVVDPWAAIICGFVAAWVLIGCNILAEKFYYDDPLEAAQLHGGCGTWGIIFTALFAKKQYVNEVYGGSTNRPYGLFLGGGGRLLAAHLVQIVAIVAWVSVTMGTMFYVLHKLNLLRISAEEEMAGLDLTSHGGMAYEYHDEVQEHSKKRAIQV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03756 489 PANTHER AMMONIUM TRANSPORTER 2 488 - -
Tsu07g03756 489 SUPERFAMILY Ammonium transporter 44 453 - -
Tsu07g03756 489 TIGRFAM amt: ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tsu07g03756 489 Gene3D Ammonium transporter AmtB like domains 25 488 IPR029020 -
Tsu07g03756 489 PANTHER AMMONIUM TRANSPORTER 2 488 - -
Tsu07g03756 489 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Tsu07g03756 489 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03756 Tsu-Chr7 43782231 43783700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03756 5 489 Inorganic Solute Cotransporters AT4G13510 74.691 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03756 K03320 - jre:109020544 808.52