Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03749 ATGGAGAGTGGAATTGATGTTGAGGGAAGATTCAGAGGAAGCAGTAAGAGAAGTTCTAGGTTTGACAGTTCATCATCATTAAGGATCAACCGTGAGGCGGATTATGTCTTTCCTAACTCTGTTAACAGGGAGgacaatgatgatgaagaggCTTTGAAATGGGCTGCCATTCAGAGGCTTCCAACTGTTACACGTTTGAGGAAAGGTTTGTTGATTACCTCTGAAGGAGAGGTTAGTGAAATTGATGTACACAAACTTGGGTTGCAAGAAAGGAAATATCTGCTAGAAAGATTAGTGAGAATTGCAGATATTGACAATGAgaaattattattgaaattcaGGGATCGTGTTAACAGAGTTGGAATTAAGATGCCTACAATCGAAGTTCGATTTGAGCACATGAGGATTGAAGCAAACGTTCATGTAGGAAAGAGAGCTTCGCCTACCCTCACTAATTATGTGCTTGATATGGTAGAGGCTCCATTTAACTATatactaagaagaagaagacaacaAGTGAACATTCTCAAGAATGTTAGTGGAATAATAAAGCCTGGCAGGATGACATTGCTGTTAGGCCCTCCAAGTTCTGGAAAAACGACACTCCTTTTGGCCCTGGCAGGAAAATTTGATCCCAAGCTAAAGTTCTCTGGGAAGGTGACTTATAATGGTCATGAGATGAATGAATTTGTACCTCAAAGAACTGCTGCTTATGTCAGTCAAAATGATCTTCACATTGGAGAATTGACAGTTAGAGAAACATTGGAGTTCTCAGCTAGATTCCAAGGTGTTGGACTTAGATACGATATGCTAGAAGAGCTATctagaagagaaaaagagagaaatattatCCCTGATCCAGATATTGATGTCTTTATGAAGGCTATTGCAACTAGGGGCCAGAAATCGAATCTTGTAATAGATTATTATTTAAAGATTTTGGGACTAGAAACCTGTGCAGATACTGTGGTGGGAAATGCAATGTTAAGAGGTGTCTCTGGAGGACAAAGGAAACGTGTTACGACAGGGGAGATGCTAGTAGGAACAGCTAAGGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACTTTTCAAGTTGTGCAATCAGTGAAGCAGTCAGTCCACCATCTCAATGGAACTGCTGTTATCTCACTCTTGCAGCCACCACCAGAGACTTACGATCTTTTTGACGACATTATTCTACTCTCTGAGGGGCACATTGTGTACCAGGGTCCTTGTGAACACGTGCTTGAATTTTTCGCTTCATTAGGTTTCATGTGTCCCAAAAGAAAATCTGTGGCAGACTTTTTACAAGAAGTGACATCAGTGAAAGATCAGGAACAATATTGGGCAGAAAGAGGGAAACCTTATAGATTTGTGACACCAAAAAAGTTTGCGAAGGCATTTGGATCATTTCATGTTGGAAGATACCTTGGTAATGAACTTGTTACTCAATTTGACAAGTCTAAAAGCCACCCAGCTGCTTTGGCGACCAACAAGTATGGAACTGGAAAATGGGAATTGTTCAAAGCTTGCTTATCAAGAGAACTTTTACTCATGAAGCgcaattcatttatatataaattcaaaCTTTGCCAACTTGCTGTGATGGCTATCGTTACCATGACCGTTTTTCTTCGAACTGGAATGCACCACGATTCAGTGATTGATGGGGGCATATATGCTGGTGCATTGTTCTTTGGAAATATGGTGGTTATGTTTAATGGATTTGCTGATCTTTCAATGACTGTTGTGAGGCTTCCCGTGTTTTACAAGCACAGGGACATGCTCTTCTACCCTTCTTGGGCATATGGTATTCCGTCATGGATTCTTAAAATCCCCATAACAATTGTTGAAGCAGTTGTTTGGACAGTCCTCACCTATTTTGTCATCGGTTACGATCCTGAAGTTGGaagACTATTTAGGCAATTCCTTCTTCTCATACTTATCAACCAAATGGGTACTGGACTATGCCGATTTCTTGGAGCAGTTGGTAGAGAAATGACTGTGGCTACAACACTTGCGTCATTTATAATCTGCTTCATTGTTGCCATGGGTGGTATGACCCTCTCGAGAGATGATATAAAAAAAGGGTGGATATGGGGATTCTGGATATCACCTATAATGTATGCACAAAATGGCTTAATGAATAATGAGTTCCTAGGGAAGACATGGAGACATgtTCTTCCTAACTCAACAAACCCGCTAGGAGTTGAAGTTTTGAAATCCCGCGGGTTCTTTACAGAGTCGTACTGGTATTGGATATGTTTCGGCGCATTGATTGGATACACATTATTGTACAACTTGGGTTACATTCTTGCTCTAACTTACTTAAATCCAATTGAGAAGCATCAAGTTGTGAAGTCAGAGCAATCTCAAAGCAGTGAGGAGAATGGTGGAAGCAAAAGTGGAATGGTTCTTCCTTTTGAACCACATTGTATAACCTTTGATGAAGTCACATATTCTATAGACATACCTCAGGAAATGAGGAGTCAGGGCGTCCTTGAAGATAAGTTGGTTCTTTTGAATGGTGTCAGTGGAGCATTTAGACCAGGTGTTCTCACTGCACTAATGGGTGTCACTGGTGCCGGAAAAACAACTTTGATGGATGTTCTTGCTGGTAGAAAAAGCGGGGGATATATTACCGGAAACATCACAATCTCTGGTTATCCCAAAAAGCAAGAAACCTTTGCAAGAATTTCTGGATACTGTGAACAAAATGATATACACTCTCCTCATATTACTGTCTATGAATCCTTGTTCTATTCAGCATGGCTCCGATTGCCTGCAGAAATCAATACAGAAACTAGGAAGGTGTTCGTGGAGGAAGTCATGGAGCTAGTGGAGCTGACCCCGCTAAGGAATGCATATGTTGGTCTCCCAGGTATTAACGGTCTCTCAACTGAGCAGCGTAAAAGATTGACCGTTGCAGTTGAGCTGGTGGGTAACCCTTCTATCATATTCATGGATGAACCAACTTCTGGGCTAGATGCAAGAGCTGCAGCTATTGTTATGAGAGCAGTTAGGAACATAGTAGACACCGGAAGAACAATTGTGTGTACCATTCACCAGCCCAGCATTGATATCTTTGAATCTTTCGACGAGCTTTTCTTAATGAAACGAGGAGGACAAGAGATATATGTGGGGCCACTTGGACGTCAATCTTCACATTTAATTAACTACTTTGAGGGAATTCAAGGTGTCAATAAGATTAAAGATGGCTACAACCCTGCAACTTGGATGTTGGAAGTTACGAGTTCAGCTAAAGAAATGGAAATGGAGACTAGTTTTGCTGAGGTGTACAGAAGTTCAACATTGTACAGGAGAAACAAAGCTATTATTGAAGAATTGAGCACTCCATATCCTGGTTCAAAGAGCCTTTATTTTCCTTCTAAGTACTCGAGGTCCTTTTTTACCCAATGTATGGCTTGTTTATGGAAACAACATTGGTCTTACTGGCGAAATCCGTTGTACAATTCAATAAGGTTTATCTTCACAATCGCTGTCGCCTTGTTGGTTGGGGGCATGTACTGGAAAGTTTCCTCCAAAATTGAAAACCAAAAAGATTTCTTTAATGCGATGGGCTTTCTGTATACTGCTACTTTGGTTATTGGTGTCAAGAATTGTAGTTCAGTGCAACCACTGGTAGGTATAGAGAGAGTAGTCTTTTATAGGGAAAAGGCTGCAGGAATGTATTCAGCATTGGCATATGCTGTTTCTCAGGCAAGCATTGAAATAAATATCCCGTATAATCTTCTGCAAGCTGTGGTTTATGGGATTATAGTTTATCCAATGCTTGGTTATGAGTGGAACGTCACTAAAATTTTATGGTACATCTTTTTCATGTTCTTCACCTTCCTTTACTATACCTACTTTGGTATGATGACAACAGCCATGTCACCAAACCTAGCTATAGCTACTCTGCTCAGTAGTGCGTCCAATTCATTCTTTAATCTCTTCTCTGGATTCTTAATCCCACAAACAAGGATCCCTATATGGTGGAGATGGTTTTATTGGATAAATCCAGCAGCTTGGACTCTAAATGGGCTGGTGACTTCACAGTTTGGAGATATAAAGGATACTTTGGATTTTAATGGAAGAATTGTTCCAATACAAGACTTTTTGCGGAATTACTTTGGTTTCAAGTATGACTTTTTAGGAATTGTTGCAGTTATAGTTGTTGGATTTACAATATGTTTTGTATTGATCTTTGCCATATGCatcaagaaattaaattttcaaagaCGATGA 4263 0.3917 MESGIDVEGRFRGSSKRSSRFDSSSSLRINREADYVFPNSVNREDNDDEEALKWAAIQRLPTVTRLRKGLLITSEGEVSEIDVHKLGLQERKYLLERLVRIADIDNEKLLLKFRDRVNRVGIKMPTIEVRFEHMRIEANVHVGKRASPTLTNYVLDMVEAPFNYILRRRRQQVNILKNVSGIIKPGRMTLLLGPPSSGKTTLLLALAGKFDPKLKFSGKVTYNGHEMNEFVPQRTAAYVSQNDLHIGELTVRETLEFSARFQGVGLRYDMLEELSRREKERNIIPDPDIDVFMKAIATRGQKSNLVIDYYLKILGLETCADTVVGNAMLRGVSGGQRKRVTTGEMLVGTAKALFMDEISTGLDSSTTFQVVQSVKQSVHHLNGTAVISLLQPPPETYDLFDDIILLSEGHIVYQGPCEHVLEFFASLGFMCPKRKSVADFLQEVTSVKDQEQYWAERGKPYRFVTPKKFAKAFGSFHVGRYLGNELVTQFDKSKSHPAALATNKYGTGKWELFKACLSRELLLMKRNSFIYKFKLCQLAVMAIVTMTVFLRTGMHHDSVIDGGIYAGALFFGNMVVMFNGFADLSMTVVRLPVFYKHRDMLFYPSWAYGIPSWILKIPITIVEAVVWTVLTYFVIGYDPEVGRLFRQFLLLILINQMGTGLCRFLGAVGREMTVATTLASFIICFIVAMGGMTLSRDDIKKGWIWGFWISPIMYAQNGLMNNEFLGKTWRHVLPNSTNPLGVEVLKSRGFFTESYWYWICFGALIGYTLLYNLGYILALTYLNPIEKHQVVKSEQSQSSEENGGSKSGMVLPFEPHCITFDEVTYSIDIPQEMRSQGVLEDKLVLLNGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKSGGYITGNITISGYPKKQETFARISGYCEQNDIHSPHITVYESLFYSAWLRLPAEINTETRKVFVEEVMELVELTPLRNAYVGLPGINGLSTEQRKRLTVAVELVGNPSIIFMDEPTSGLDARAAAIVMRAVRNIVDTGRTIVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRQSSHLINYFEGIQGVNKIKDGYNPATWMLEVTSSAKEMEMETSFAEVYRSSTLYRRNKAIIEELSTPYPGSKSLYFPSKYSRSFFTQCMACLWKQHWSYWRNPLYNSIRFIFTIAVALLVGGMYWKVSSKIENQKDFFNAMGFLYTATLVIGVKNCSSVQPLVGIERVVFYREKAAGMYSALAYAVSQASIEINIPYNLLQAVVYGIIVYPMLGYEWNVTKILWYIFFMFFTFLYYTYFGMMTTAMSPNLAIATLLSSASNSFFNLFSGFLIPQTRIPIWWRWFYWINPAAWTLNGLVTSQFGDIKDTLDFNGRIVPIQDFLRNYFGFKYDFLGIVAVIVVGFTICFVLIFAICIKKLNFQRR 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03749 1420 Pfam ABC-2 type transporter 391 444 IPR043926 GO:0140359
Tsu07g03749 1420 CDD ABCG_PDR_domain2 815 1053 IPR034003 -
Tsu07g03749 1420 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 818 1070 IPR003439 GO:0005524
Tsu07g03749 1420 Pfam ABC-2 type transporter 1143 1359 IPR013525 GO:0016020|GO:0140359
Tsu07g03749 1420 Pfam ABC-2 type transporter 512 724 IPR013525 GO:0016020|GO:0140359
Tsu07g03749 1420 MobiDBLite consensus disorder prediction 1 23 - -
Tsu07g03749 1420 Gene3D - 162 465 IPR027417 -
Tsu07g03749 1420 Pfam ABC-transporter N-terminal 102 152 IPR029481 -
Tsu07g03749 1420 Pfam ABC transporter 846 998 IPR003439 GO:0005524
Tsu07g03749 1420 Pfam Plant PDR ABC transporter associated 729 791 IPR013581 -
Tsu07g03749 1420 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 20 1420 - -
Tsu07g03749 1420 Gene3D - 815 1060 IPR027417 -
Tsu07g03749 1420 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 433 IPR003439 GO:0005524
Tsu07g03749 1420 PANTHER ATP-BINDING CASSETTE TRANSPORTER 20 1420 - -
Tsu07g03749 1420 Pfam ABC transporter 176 358 IPR003439 GO:0005524
Tsu07g03749 1420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 433 IPR027417 -
Tsu07g03749 1420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 841 1054 IPR027417 -
Tsu07g03749 1420 MobiDBLite consensus disorder prediction 1 17 - -
Tsu07g03749 1420 CDD ABCG_PDR_domain1 157 415 IPR034001 -
Tsu07g03749 1420 SMART AAA_5 185 410 IPR003593 -
Tsu07g03749 1420 SMART AAA_5 855 1047 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03749 Tsu-Chr7 43715379 43723480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03749 170 366 Calmodulin-binding Proteins AT2G36910 24.873 6.24e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03749 K08711 - gmx:100813417 2028.06