Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03744 ATGGATGCAACTTTGTGGAATTGGAATACCCTTTTGAGTAAGATCTTTGAATTGCCTGTTTTGGAACTTGTGGCAATATGTATTAATTTGGTTGttcttgttttgtttctattgagGGAGGTTTTTATTTGTGTTGGTGGAAGAGTTTGGTTTTTTAAggataatattaataataatgttgttGTTGGAAATGGTGGTTTGATTGCTGAAGAAACGGTTGAGATTAGAATTGGGACATGGTTTAAGGTATCTGTGTTGtcttgtttttatgttttgttggtGCAAGTTTTGGTTTTGGGATTTGAGGGTGTTGTTTTGATTAAGGACAAGTTTGCGGTTGTGGAAGATTTGTCTCTTGTTTCTGTGCCATTTGTGCAaagtttggtttggattgtGTTGTGTTTCACTGCTTTGCATTGCAAGTACAAGGTGTCTCAGAAGTTTCCAATTTTGCTGAGAGTTTCTTGGTTTCTgctgtttgttgtttgtttgtgtgGTTTATATGTTGACGGGAGAGGGTTTTGGGTCGAAGGTTCCAAGCATATGCGTTCTCATGTTTTGGCAAATTTCGCTGTTACCCCTGCTCTTGCCTTCTTGTGTTTTGTCGCAATTAGGGGTGTTTCTGGGATACAAGTTTGTAGGAACTCTGAGAATCAACAGCCATTACTTCTTgatgaagaggaagatgaagaacCGGGGTGTCTCAAGGTTACTCCTTATAGTGATGCTGGACTTTTTAGTTTGGCCACTCTGTCTTGGCTTAACTCGATTCTTTCCATTGGTGCAAAGAGACCACTTGAGCTTAAGGACATTCCCCTTGTTGCACCTAAAGATCGAGCCAAAGcaaattttaaggttttgaattCAAATTGGGAGAAAATGAAGGCCGAAAACACGTCGAATCAGCCTTCATTAGCTTGGACACTTCTAAAGTCATTCTGGAAGGAGGCAGCTATTAATGCCATTTTTGCTGGTGTCACTACTCTTGTCTCATATGTAGGTCCATACATGATAAGTTACTTTGTTGATTACTTGAGTGGTATAGAGACTTACCCTCATGAGGGGTATGTCCTTGCAGGGATATTCTTTGTTGCAAAGCTTGTGGAGACCTTCACAACGAGGCAATGGTATCTAGGAGTGGACATTTTGGGGATGCATGTTAGGTCCGCTTTAACAGCAATGGTATATCAAAAGGGGCTTAGGTTATCGAGCTTAGCTAGGCAAAGTCACACAAGTGGTGAGATTGTTAACTACATGGCTATTGATGTTCAGAGGGTAGGAGACTACTCTTGGTATCTTCATGACATGTGGATGCTTCCTCTGCAGATTATTCTAGCCCTCGCAATTTTGTATAAGAATGTTGGAATTGCTTCCATTGCAACACTTGTTGCCACAATCATTTCTATTGTAGTCACTGTTCCCGTGGCTCGGGTCCAAGAAGATTATCAAGACAAATTAATGGCTGCTAAGGatgaaagaatgagaaaaacaTCTGAGTGCCTAAGGAACATGAGGATTCTCAAGCTGCAGGCTTGGGAGGACAGATATCGAATAAGATTGGAGGAAATGCGTGGAGTAGAGTTCAAGTGGCTTAGGAAAGCCCTATATTCTCAGGCTTTCATAACTTTCATGTTCTGGAGCTCACCTATATTTGTTTCAGCTGTCACTTTTGCTACTTGCATATTGTTGGGCGGTAAGCTAACTGCAGGAGGTGTACTTTCTGCTCTAGCGACTTTCAGGATCCTCCAAGAACCGTTGAGGAATTTTCCAGATTTGGTATCTACAATGGCTCAGACAAAAGTTTCTATTGATCGTTTATCTTGTTTCCTACTGGAGGAAGAATTGCAGGAAGATGCAACTATTGTCTTGCCACAAGGAATTTCTAACATTGCCATAGAAATTAAGGATAGTGAATTCTCTTGGGACCTTTCATCTGCCAGGCCTACTCTTTCTGAGATAAATATGAAAGTTGAAAAGGGGATGCGTGTCGCTGTTTGTGGTACGGTTGGTTCAGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAAATTCCTAAGCTGTCTGGTGAAGTCAGTGTGTGTGGTTCTTCTGCATATGTCTCCCAATCAGCATGGATACAATCAGGAACTATAGAAGAAAATATACTCTTCGGAAGCCCAAAGGACAAAGCAAAGTACAAGAATGTTATTCATGCTTGTTCACTGAAAAAGGATCTAGAACTTTTCTCACATGGAGATCAGACAATTATTGGTGATAGAGGTATAAACCTAAGCGGGGGTCAGAAGCAGCGGGTACAGCTTGCCCGAGCACTCTACCAAGATGCTGATATTTATCTTCTTGATGATCCCTTCAGCGCAGTTGACGCGCACACTGGATCAGAGTTGTTTAGGGAGTATATATTGACGGCACTAGCAAATAAAACAGTCATTTTCGTGACCCATCAAGTTGAATTTCTTCCTGCTACTGATTTGATACTGGTTCTCAAGGAAGGTTCCATCATACAAGCCGGAAAGTATGATGATCTTTTACAAGCAGGAACAGATTTTAAAGCTCTAGTTTCAGCTCACCATGAAGCCATAGAGGCTATGGATATACCTGCTCACTCCTCTGAAGATTCAGACGAAAATTTAACATTGGAGGCATGTGTTATGACCAGTAAGAAGTCCATTTGTTCTGCTAACGATATCGACAGTTTGACAAAGGAAATGCAAGAGGGACCATCATCTTCAGATCAAAAAACAGCTAAGgagaagaaaaaagcaaaaaggtCAAGAAAAAAACAGCTTGTTCAGGAAGAGGAGAGGGTTAGAGGTAGAGTAAGCATGAAGGTGTATCTTTCATACATGGCAGCGGCATATAAAGGTTTATTGATTCCACTCATAATCATAGCACAAGCGTTATTTCAGTTCCTTCAGATTGCTAGTAACTGGTGGATGGCATGGGCTAACCCTCAAACAGAAGGAGATGAGCCCAAAGTAACTCCCAtggttcttcttcttgtttACATGGCCCTTGCTTTTGGCAGTTCTTGGTTTATATTTGTAAGGGCTGTTCTAGTCGCTACATTTGGTCTCGCGGCTGCACAGAAGCTATTCTTGAAGATGCTTAGATGTGTTTTCCATGCACCAATGTATTTCTTTGACTCTACACCAGCTGGAAGGATCTTGAACCGgGTTTCAGTTGATCAAAGTGTTGTGGATCTTGACATCCCTTTTAGACTTGGTGGGTTTGCTGCAACAACAATACAGCTTATTGGTATTGTTGGCGTAATGACAGAAGTTACATGGCAAGTTTTGCTCTTAGTCATCCCAATGGCCATTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCATCGAGGGAACTGGTCCGAATTGTAAGCATCCAGAAATCACCAATTATAAATCTTTTTGGTGAATCAATTGCTGGAGCATCCACCATCAGGGGTTTTGGACAAGAAAAAAGGTTCATGAAGCGAAACCTCTATCTTCTCGATTGTTTTGCACGACCTTTCTTCTGCAGTCTTGCTGCTATTGAGTGGCTCTGCCTGCGTATGGAGTTACTGTCCACCTTTGTGTTTGCTTTCTGCATGGTATTACTTGTTAGCTTTCCCCGTGGAACTATTGACCCAAGCATGGCTGGACTTGCTGTGACATATGGTCTGAACTTAAATGCGCGCTTATCACGTTGGATACTTAGCTTTTGCaaacttgaaaataaaattatatctaTTGAGAGAATTTACCAGTACAGCCAAATTCCTAGTGAAGCACCGGCAATAATTGAAGATTCTCGCCCTCCATCCTTATGGCCTGAAAATGGCACAATTGAAATAATTGATTTGAAGGTCCGTTACAAAGAAAATCTTCCTTTGGTGCTTCATGGAGTATCATGCATATTTCCTGGTGGAAAGAATATAGGGATAGTTGGACGAACCGGCAGTGGCAAATCTACTTTGATTCAAGCATTATTTCGATTGATTGAACCAGCAGATGGAAGTATCCACATAGACAACATCAATATTTTAGAGATTGGTCTTCATGACCTCCGAAGCCATCTCAGTATCATACCACAGGATCCAACCTTATTTGAAGGGACCATTCGAGGCAATCTTGATCCTCTTGAGGAGCACTCAGATAAAGATATTTGGGAGGCGCTAGATAAGTCTCAACTTGGAGATATCATTCGTGAGAAAGGACAAAAGCTTGATACACCAGTTATAGAAAATGGAGATAATTGGAGTGTAGGACAGCGGCAACTTGTTTCTCTTGGCCGAGCTCTACTGAAGCAGTCGAAAATACTTGTACTTGATGAAGCAACAGCATCCGTTGATGCTGCCACCGATAATCTTATCCAGAAGATCATTCGAACAGAGTTCAAAGACTGCACTGTGGTCACCATTGCGCATCGTATTCCTACTGTCATTGACAGTGATCAAGTTCTGGTGCTCAGTGATGGTCGAGTTGCTGAGTTTGACACCCCTTTACGACTATTAGAGGACAAATCATCCATGTTTCTAAAGTTGGTGACTGAGTACTCCTCGCGGACAAGTGGTATACCAGAATTTTAG 4572 0.3994 MDATLWNWNTLLSKIFELPVLELVAICINLVVLVLFLLREVFICVGGRVWFFKDNINNNVVVGNGGLIAEETVEIRIGTWFKVSVLSCFYVLLVQVLVLGFEGVVLIKDKFAVVEDLSLVSVPFVQSLVWIVLCFTALHCKYKVSQKFPILLRVSWFLLFVVCLCGLYVDGRGFWVEGSKHMRSHVLANFAVTPALAFLCFVAIRGVSGIQVCRNSENQQPLLLDEEEDEEPGCLKVTPYSDAGLFSLATLSWLNSILSIGAKRPLELKDIPLVAPKDRAKANFKVLNSNWEKMKAENTSNQPSLAWTLLKSFWKEAAINAIFAGVTTLVSYVGPYMISYFVDYLSGIETYPHEGYVLAGIFFVAKLVETFTTRQWYLGVDILGMHVRSALTAMVYQKGLRLSSLARQSHTSGEIVNYMAIDVQRVGDYSWYLHDMWMLPLQIILALAILYKNVGIASIATLVATIISIVVTVPVARVQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIRLEEMRGVEFKWLRKALYSQAFITFMFWSSPIFVSAVTFATCILLGGKLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSIDRLSCFLLEEELQEDATIVLPQGISNIAIEIKDSEFSWDLSSARPTLSEINMKVEKGMRVAVCGTVGSGKSSFLSCILGEIPKLSGEVSVCGSSAYVSQSAWIQSGTIEENILFGSPKDKAKYKNVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALANKTVIFVTHQVEFLPATDLILVLKEGSIIQAGKYDDLLQAGTDFKALVSAHHEAIEAMDIPAHSSEDSDENLTLEACVMTSKKSICSANDIDSLTKEMQEGPSSSDQKTAKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDEPKVTPMVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFLKMLRCVFHAPMYFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFAATTIQLIGIVGVMTEVTWQVLLLVIPMAIACLWMQKYYMASSRELVRIVSIQKSPIINLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPRGTIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAIIEDSRPPSLWPENGTIEIIDLKVRYKENLPLVLHGVSCIFPGGKNIGIVGRTGSGKSTLIQALFRLIEPADGSIHIDNINILEIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKDIWEALDKSQLGDIIREKGQKLDTPVIENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDAATDNLIQKIIRTEFKDCTVVTIAHRIPTVIDSDQVLVLSDGRVAEFDTPLRLLEDKSSMFLKLVTEYSSRTSGIPEF 1523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03744 1523 Gene3D ABC transporter type 1, transmembrane domain 919 1258 IPR036640 GO:0005524|GO:0016021
Tsu07g03744 1523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 629 854 IPR027417 -
Tsu07g03744 1523 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 318 598 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu07g03744 1523 SUPERFAMILY ABC transporter transmembrane region 306 606 IPR036640 GO:0005524|GO:0016021
Tsu07g03744 1523 CDD ABC_6TM_ABCC_D1 319 606 IPR044746 GO:0140359
Tsu07g03744 1523 Gene3D - 609 874 IPR027417 -
Tsu07g03744 1523 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 82 1523 - -
Tsu07g03744 1523 SUPERFAMILY ABC transporter transmembrane region 957 1257 IPR036640 GO:0005524|GO:0016021
Tsu07g03744 1523 Coils Coil 912 932 - -
Tsu07g03744 1523 CDD ABCC_MRP_domain2 1275 1495 - -
Tsu07g03744 1523 ProSitePatterns ABC transporters family signature. 757 771 IPR017871 GO:0005524
Tsu07g03744 1523 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1277 1511 IPR003439 GO:0005524
Tsu07g03744 1523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1267 1506 IPR027417 -
Tsu07g03744 1523 MobiDBLite consensus disorder prediction 901 932 - -
Tsu07g03744 1523 Pfam ABC transporter transmembrane region 320 586 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu07g03744 1523 Pfam ABC transporter transmembrane region 960 1202 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu07g03744 1523 CDD ABC_6TM_ABCC_D2 958 1252 IPR044726 GO:0140359
Tsu07g03744 1523 Pfam ABC transporter 650 784 IPR003439 GO:0005524
Tsu07g03744 1523 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 960 1230 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu07g03744 1523 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 632 855 IPR003439 GO:0005524
Tsu07g03744 1523 CDD ABCC_MRP_domain1 632 832 - -
Tsu07g03744 1523 Gene3D ABC transporter type 1, transmembrane domain 298 608 IPR036640 GO:0005524|GO:0016021
Tsu07g03744 1523 SMART AAA_5 659 832 IPR003593 -
Tsu07g03744 1523 SMART AAA_5 1303 1488 IPR003593 -
Tsu07g03744 1523 Gene3D - 1260 1513 IPR027417 -
Tsu07g03744 1523 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 82 1523 - -
Tsu07g03744 1523 Pfam ABC transporter 1294 1442 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03744 Tsu-Chr7 43612697 43621040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03744 632 848 Calmodulin-binding Proteins AT2G36910 30.932 1.55e-21 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03744 07 43612697 43621040 Tsu07g03744 07 43612697 43621040 ECH
Tsu07g03744 07 43612697 43621040 Tsu01g02610 01 29160068 29166918 PCT