Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03740 ATGTCTATTTACCTTCTGTCTTTGTTGAACATCTTTCTTCTCATTCCATCCTTAAACTTAACTGAGATTAGGACAGTTAAGGCTGAAGCCTTTATTAATCTGCATGATTTAATGGCAGCTAACATTTCTGTTAGCGAAACTGGATATCTTTTGACCTTATATAACAATGCTGCAAAGGTGGTTGACATGATCATCTGGCCTTATATTGTATATCAGTCTAGGGTTCAATGCGCTGTGCCTGTGGAATCACATTTCCAGCTCCCATGGCAAAAGCTCCAGCTGATAAGAGTTCCAATTCCACTGACAGGAGTACATGACGTTGAGGTACCTTACATGAGAGAGAAGTTCACACTTTTAGTGTCCTCTGGAAGGTCTACCGGACCAAGTTCCTCAAAATTCAATCCGAGCAAGTGGCCTTGTTGTGGAGTTTATAAAAGAGGAAATCGAATATGGATTTTCAGCAAACCATGTATATATGAAACTACAATAGAGCACTGTGAATCAGCAAATAGTGGGACTGCCACTTGTAATCAAACTTCTTCTAGTGAAGCCCGTTCACGAACCTCAGTGTATACCAAGGCTGAGGATTTGAGCCACCGGCGCGCTATTGCATTGGCTATGGTAACCACAACAACTACTCAGGCAGCAGTTGCTACTGCCCAAGCAGCTGTTGAAGTCATGAGGCTTGCCAGTCCTTCTAAAATTGCCAGAAAATACTACAATGCAGCTGTTGTAATTCAAACAGCATTCAGAGGCTATCTGTCCAGAGAAGGAAGTAGCGTCACGGATGAGTGGGATGGTCATCAACATACATTAGAGGAAATCAAAGCCATGTTGCAGAAAACTAAGCAGGCATCTTCTGAAAATGCACTCTCGACAGCATTTTCTCGTCAGGTGAAGAAACGACTATCGTTTCCATCTCCTAAAGCAGATGCTTGTGGTGCCATGAGTGACACAGAATCAGAAAGGAGTTTAAGGCGTCCGAGTTCAACACATGGCATGCAGTTTGTAACTGGGAGAAGATCAAGTACATTGTTGAGGAGACAACCTTGGTGA 1056 0.429 MSIYLLSLLNIFLLIPSLNLTEIRTVKAEAFINLHDLMAANISVSETGYLLTLYNNAAKVVDMIIWPYIVYQSRVQCAVPVESHFQLPWQKLQLIRVPIPLTGVHDVEVPYMREKFTLLVSSGRSTGPSSSKFNPSKWPCCGVYKRGNRIWIFSKPCIYETTIEHCESANSGTATCNQTSSSEARSRTSVYTKAEDLSHRRAIALAMVTTTTTQAAVATAQAAVEVMRLASPSKIARKYYNAAVVIQTAFRGYLSREGSSVTDEWDGHQHTLEEIKAMLQKTKQASSENALSTAFSRQVKKRLSFPSPKADACGAMSDTESERSLRRPSSTHGMQFVTGRRSSTLLRRQPW 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03740 351 MobiDBLite consensus disorder prediction 306 334 - -
Tsu07g03740 351 PANTHER PROTEIN IQ-DOMAIN 14-LIKE ISOFORM X1 139 256 - -
Tsu07g03740 351 PANTHER PROTEIN IQ-DOMAIN 14-LIKE ISOFORM X1 264 296 - -
Tsu07g03740 351 ProSiteProfiles IQ motif profile. 239 268 IPR000048 GO:0005515
Tsu07g03740 351 PANTHER IQ-DOMAIN 5-RELATED 139 256 - -
Tsu07g03740 351 PANTHER IQ-DOMAIN 5-RELATED 264 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03740 Tsu-Chr7 43594827 43598594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03740 251 301 IQD Protein Family AT4G00820 47.273 2.73e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03740 - - dcr:108211725 134.806