Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03739 ATgaaaaccaagtttttcatATTCTTCTGTTacattgtaattttttgtttctcttatAGTTTTTCTGTTGCTTCAAATGATGAAGTATCAGTTTTGCTTTCTATAAAAGAAAGTCTTGTTGATCCTTTAAACAGTCTTCATGATTGGAAATTGGATGCAGATCATTGTAATTGGACCGGAATCAAATGTAACGCGAACGGAATGGTAGAGAATCTTGATCTTTCTCACAAGAATCTCAGTGGTATAGTATCCAACGATATACAAAGACTTCAAAATCTTACTTCTCTTAACTTATGTTGCAATGCATTTTCATCACTTTTTCCAAAATCTATAGTAAATCTTACCACATTGAACATTCTTGATGTAAGTCAGAATTTCTTCATTGGTGAATTTCCATTAGGATTTGGAAAGGCGTTGAAACTCGCGAGCTTAAATGTTTCAAGCAATGAGTTCAATGGTTCAATTCCTTTGGACATTGGAAATGCAACTTCATTAGAAATGCTTGATCTTAGAGGTAGTTTCTTTGAAGGTTCGATTCCGAAATCATTTGGAAACTTGCATAAGTTGAAGTTTCTTGGTTTATCTGGGAATAATCTCACTGGAAAAATTCCTGGTGAGCTTGGAAAACTTTCCTCATTGGAGTATATGATTCTCGGCTATAACGAATTCGAAGGTGAGATTCCATCAGAATTTGGAAATCTTACCAGTCTAAAGTATCTTGATTTAGCAGTTTCTAATCTTGGTGGTGAGATTCCAAATGAATTAGGAAATCTCAAGTTATTAGATACACTTTTCTTATATAACAACAATTTTGAAGGAAGAATTCCATCACAAATTGGTAACATTACTTCTTTGCAgtttttggatttttctgatAACAATTTGTCAGGAAAAATTCCAGATGAAATGAGTCTGCTGAAGAGTTTGAAGCTTCTGAATTTCATGGGAAATCGGTTATCCGGTTTTGTTCCTTCTGGAATTGGTAACTTGCCTCAACTAGAGGTTCTTGAGCTATGGAACAATTCATTATCAGGTCCATTGCCTAGTAACCTCGGCGAGAGTTCACCGTTGCAATGGCTGGATGTATCATCCAATTCACTCTCTGGTGAGATTCCAGTAACTCTTTGCAGCAAAGGAAATCTCACCAAGCTCATACTTTTCAACAATGCTTTCTCCGGTCCAATTCCATCAAGCCTATCGACGTGTTCTTCACTTGTTCGTgttcgaattcacaacaatttaCTTTCTGGTAATGTTCCTGTTGGTCTTGGCAAGCTTGAGAAGCTTCAAAGGTTAGAGTTAGCTAACAATAGTCTCACTGGTGAAATTCCAGATGATATTCCTTCTTCCGCGTCGCTTTCTTTCATTGATCTCTCAAGAAACAGACTTCATTCTTCTCTACCTTCCACCattctttccatttcaaatcttcaagttttcATGGTCTCACACAATAGCTTGGAAGGTAAAATCCCTGACCAATTTCAGGACTCTCCCTCACTTACTGTTCTTGACCTCTCATCGAATCATTTCTCCGGAACCATTCCAGAAAGCATAGGTTCATGTCAAAAATTAGTCAATTTGAACCTACAAAATAACCTTTTGATTGGTGAAATCCCACAAACATTAGCTAACATGCCTACATTAGCCATGCTTGATCTTTCCAACAATTCGTTGACCGGTCATATACCTGAAAACTTTGGTTTATCACCAGCTCTTGAAGCATTAAATGTCTCATACAACAAGCTTGAAGGTTCTGTACCAGAAAATGGTGTTCTGAGAACTATAAACCCGAATAATCTCGTTGGAAATGATGGCCTATGTGGTGGTATCCTCCCTTCATGTTATCAAAACTCAGCATACTCCTCAAGGCATGGAAGTTCACATGAAAAGCACATTATCACAGGATGGATTATTGGAATATCATCGATTCTAGCCATTGGAATTACAATTTTGGTAGCAAGATCTTTATATGTAAGGTGGTACACCGGCGGTTTTTGCTTCAGAGAGAGATTTTATAAAGGTAGCAAAGGGTGGCCATGGAGATTGATGGCATTTCAAAGACTTGGTTTTACAAGCACTGACATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGAATGGGAGGTACCGGCGTTGTTTACAAGGCTGAGGTACCGCATTCTAACACAGTTGTAGCAGTGAAAAAGTTGTGGAGATCAGGAAATGATGTTGAAgtaggaggaggaggaggaggaggaggcaGTGATGAGCTTGTTGGAGAGGTCAACCTTTTAGGAAGATTAAGGCATAGAAACATTGTTAGATTATTAGGATTTCTTCATAATGACACTGATTTGATGATAGTTTATGAATTTATGCCCAATGGAAACCTTGGAGATGCCTTGCATGGTAGGCAAGCAGTTAGACAGCTTGTGGATTGGGTTTCAAGATATAATATAGCATTAGGAGTTGCTCAAGGACTTGCTTATCTTCATCATGACTGTTATCCACCGGTTATTCATCGCGACATTAAGTCAAATAATATACTTCTTGATGCAAATCTTGAGGCAAGGATAGCCGATTTTGGATTGGCCAAGATGATGGTCCGTAAGAACGAAACGGTCTCCATGGTTGCTGGCTCCTATGGCTACATTGCTCCTGAATATGGATATGCATTGAAGGTGGATGAAAAGATTGATGTATACAGTTATGGAGTAGTTTTACTAGAGCTTATCACAGGAAAGAGGCCATTAGATCAAGAATTTGGAGAAAGTGTAGACATTGTAGAATGGATTAGAAGGAAGATTAGAGATAACAAATCTCTAGAAGAAGCATTAGATCCAAGTGTAGGAAACTGCAGACATGTTATAGAAGAGATGCTTTTAGTTTTAAGAATAGCAGTTATTTGCACTGCTAAGCTTCCTAAGGAAAGACCAAGTATGAGAGATGTGACAATGATGCTTGGAGAGGCAAAGCCAAGAAGAAAAATCAGTGGCAACAATGAAACATCTTTAGCAGCTAACAACATTAATAACAAGGAGATGTCAGTTTTTAGCACATCACCAGTTAGTGGCCTTCTTTAG 3066 0.3637 MKTKFFIFFCYIVIFCFSYSFSVASNDEVSVLLSIKESLVDPLNSLHDWKLDADHCNWTGIKCNANGMVENLDLSHKNLSGIVSNDIQRLQNLTSLNLCCNAFSSLFPKSIVNLTTLNILDVSQNFFIGEFPLGFGKALKLASLNVSSNEFNGSIPLDIGNATSLEMLDLRGSFFEGSIPKSFGNLHKLKFLGLSGNNLTGKIPGELGKLSSLEYMILGYNEFEGEIPSEFGNLTSLKYLDLAVSNLGGEIPNELGNLKLLDTLFLYNNNFEGRIPSQIGNITSLQFLDFSDNNLSGKIPDEMSLLKSLKLLNFMGNRLSGFVPSGIGNLPQLEVLELWNNSLSGPLPSNLGESSPLQWLDVSSNSLSGEIPVTLCSKGNLTKLILFNNAFSGPIPSSLSTCSSLVRVRIHNNLLSGNVPVGLGKLEKLQRLELANNSLTGEIPDDIPSSASLSFIDLSRNRLHSSLPSTILSISNLQVFMVSHNSLEGKIPDQFQDSPSLTVLDLSSNHFSGTIPESIGSCQKLVNLNLQNNLLIGEIPQTLANMPTLAMLDLSNNSLTGHIPENFGLSPALEALNVSYNKLEGSVPENGVLRTINPNNLVGNDGLCGGILPSCYQNSAYSSRHGSSHEKHIITGWIIGISSILAIGITILVARSLYVRWYTGGFCFRERFYKGSKGWPWRLMAFQRLGFTSTDILACIKETNVIGMGGTGVVYKAEVPHSNTVVAVKKLWRSGNDVEVGGGGGGGGSDELVGEVNLLGRLRHRNIVRLLGFLHNDTDLMIVYEFMPNGNLGDALHGRQAVRQLVDWVSRYNIALGVAQGLAYLHHDCYPPVIHRDIKSNNILLDANLEARIADFGLAKMMVRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELITGKRPLDQEFGESVDIVEWIRRKIRDNKSLEEALDPSVGNCRHVIEEMLLVLRIAVICTAKLPKERPSMRDVTMMLGEAKPRRKISGNNETSLAANNINNKEMSVFSTSPVSGLL 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03739 1021 Gene3D Phosphorylase Kinase; domain 1 692 786 - -
Tsu07g03739 1021 SUPERFAMILY L domain-like 49 315 - -
Tsu07g03739 1021 Gene3D Ribonuclease Inhibitor 243 307 IPR032675 -
Tsu07g03739 1021 PANTHER UNNAMED PRODUCT 6 995 - -
Tsu07g03739 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Tsu07g03739 1021 Gene3D Transferase(Phosphotransferase) domain 1 787 1009 - -
Tsu07g03739 1021 ProSitePatterns Protein kinases ATP-binding region signature. 706 730 IPR017441 GO:0005524
Tsu07g03739 1021 SUPERFAMILY RNI-like 251 596 - -
Tsu07g03739 1021 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Tsu07g03739 1021 ProSiteProfiles Protein kinase domain profile. 700 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03739 1021 SMART LRR_typ_2 234 258 IPR003591 -
Tsu07g03739 1021 SMART LRR_typ_2 546 569 IPR003591 -
Tsu07g03739 1021 SMART LRR_typ_2 330 354 IPR003591 -
Tsu07g03739 1021 SMART LRR_typ_2 186 210 IPR003591 -
Tsu07g03739 1021 SMART LRR_typ_2 90 113 IPR003591 -
Tsu07g03739 1021 SMART LRR_typ_2 426 450 IPR003591 -
Tsu07g03739 1021 SMART LRR_typ_2 282 306 IPR003591 -
Tsu07g03739 1021 SMART LRR_typ_2 499 522 IPR003591 -
Tsu07g03739 1021 SMART LRR_bac_2 354 374 - -
Tsu07g03739 1021 SMART LRR_bac_2 498 518 - -
Tsu07g03739 1021 SMART LRR_bac_2 570 590 - -
Tsu07g03739 1021 SMART LRR_bac_2 450 470 - -
Tsu07g03739 1021 Pfam Leucine rich repeat 524 583 IPR001611 GO:0005515
Tsu07g03739 1021 Pfam Leucine rich repeat 164 222 IPR001611 GO:0005515
Tsu07g03739 1021 Pfam Leucine rich repeat 453 511 IPR001611 GO:0005515
Tsu07g03739 1021 Gene3D Ribonuclease Inhibitor 23 242 IPR032675 -
Tsu07g03739 1021 SUPERFAMILY Protein kinase-like (PK-like) 696 982 IPR011009 -
Tsu07g03739 1021 Gene3D Ribonuclease Inhibitor 308 623 IPR032675 -
Tsu07g03739 1021 ProSiteProfiles Leucine-rich repeat profile. 284 306 IPR001611 GO:0005515
Tsu07g03739 1021 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 995 - -
Tsu07g03739 1021 Pfam Protein kinase domain 702 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03739 1021 SMART serkin_6 700 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03739 Tsu-Chr7 43585474 43588906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03739 4 1021 Receptor kinase-like Gene Family AT1G08590 58.149 0.0 1152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu07g03739 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03739 - - gmx:100811284 1625.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03739 07 43585474 43588906 Tsu07g03739 07 43585474 43588906 ECH