Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03726 ATGGAAGCTCGTCCTGCTTTTTCAATTGAAAGATCAAGTTACAATCAGCTGAATAACATAGGGATGTCTGGAGCACTTCCTTCATCGTTGTCTGTCCATCCAACACCTCTAGAAGAGACATACCCCAGATTTTCTGATTCACAGCCTGCTTTTGTAGAAAAAGATCTTAAGACAAGAACTTTTAATTCCAGTGGAGCAGTTGGGCATATGTTTTCATCTTCCCCTGGATATTCAACAGATCTTCATCACTCATCCCTTTCACCGCATGAAAAACACTCTAGAAATGCTCATTTTATTACACAGTCAATGAGCAACGTGGCTTCGGTGCCATTACCGTATTCTTCAAATAATGGTCCGCTACCTTCTACAACATCAACACATTATTCCAATGGAAGCAGTGCTTCTTGGCATGCAGATTCCTTGCCTAGCTTTCTTGATTTCTCTGTGAATGCCTCAATTGATAATAACCAAGTAGAGAGCAGTGCCTGCAATATTATCGCTACTGAGGAGTTTCCTAAGCGAAATGATTGGCAAGAGTGGGCTGACCAGCTAATCAGTGACGACGATACTTTGACTTCTAATTGGAATGATCTTCTTGCTGATAATATTCAAGATCTTGAGCCAAAGgcGGCGGATCCCATTTCGAAGTCATCTTCACAATTTTCGGCAGGACACCAGTCACAAGGCCACCAACAACTTCCAGCTCTATCTGGAGAAAACCATGTTGGTGTCGCTCCATCTTCCTCAGCAAATTCTGCACCTGCCAAGCCACGGATGCGTTGGACTCCTGAGCTTCACGAGGCATTTGTGGAAGCTGTCACCCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGATATAGACCAGAGTCTTCTGAAGGAGCTGCGGAGAAAAAACTAAGCCCCATTGAAGATATTTCATCGCTAGATTTGAAAACGTAA 1020 0.4294 MEARPAFSIERSSYNQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPAFVEKDLKTRTFNSSGAVGHMFSSSPGYSTDLHHSSLSPHEKHSRNAHFITQSMSNVASVPLPYSSNNGPLPSTTSTHYSNGSSASWHADSLPSFLDFSVNASIDNNQVESSACNIIATEEFPKRNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKAADPISKSSSQFSAGHQSQGHQQLPALSGENHVGVAPSSSANSAPAKPRMRWTPELHEAFVEAVTQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAAEKKLSPIEDISSLDLKT 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03726 339 MobiDBLite consensus disorder prediction 211 258 - -
Tsu07g03726 339 Pfam Myb-like DNA-binding domain 258 309 IPR001005 -
Tsu07g03726 339 MobiDBLite consensus disorder prediction 213 235 - -
Tsu07g03726 339 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 256 310 IPR006447 GO:0003677
Tsu07g03726 339 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL4-RELATED 25 339 - -
Tsu07g03726 339 SUPERFAMILY Homeodomain-like 254 310 IPR009057 -
Tsu07g03726 339 MobiDBLite consensus disorder prediction 310 339 - -
Tsu07g03726 339 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 25 339 IPR044848 GO:0003700
Tsu07g03726 339 Gene3D - 255 314 - -
Tsu07g03726 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 253 313 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03726 Tsu-Chr7 43477103 43483830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03726 1 338 G2-like Transcription Factor Family AT4G28610 44.699 1.05e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu07g03726 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03726 - - gmx:100810560 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03726 07 43477103 43483830 Tsu07g03726 07 43477103 43483830 ECH
Tsu07g03726 07 43477103 43483830 Tsu01g03336 01 41305238 41308224 PCT