Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03724 ATGGCAAATATTCAAAATTCTATTGCTTCTGTCTTTTATATACTACTTATATCTTTGCTACCATTGAAAATCACTTCAACACTAAAAACAGAAGCAGAAGCTCTTGTCAAATGGAAAAACAGTTTAACCTCTCCTCTTCCTTTTCCTTCTCCTCTCAGTTCATGGTCACTCACCAACCATATCAACCTTTGCAATTGGGATGCTGTTGTTTGTGACAACACTAATACAACTATCTTAGAGATAAACTTGTCTAATGCTAATCTCAGTGGAACACTCACTGCCTTGGATTTTGCTTCTCTCCCAAACCTCACCCTCCTCAACCTTAATAGCAACAGGTTTCATGGATCAATACCATCGACAATTGGCAACCTCTCGAGGCTCACTTTCTTGGACTTGGAAAACAACTTACTTGAAGACACACTCCCTTCTGAGCTAGGCCAACTAAGGAAACTTCAGCATGTTAGTTTTTACAACAACAATTTCAATGGTACTATTCCTTATCAGCTCACTAATCTCCCTAAGGTAAGTTACCTTGAACTTGGATCAAACTTTTTTGTATCTTCCTTTGACTGGTCCAAATATTCAAACATGCCTTCCTTAAATTACCTTGGTTTGGAAGAAAATAGATTCACTGGTGAAATTCCAAGTTTCATACTTGAGTGCAAGAACTTAACATACCTTGACCTCTCTCAGAACAACTGGAATAGTAAAATACCAGAATCCGTTTATGGTAATTTGAAAAGGCTTGAATATCTCAATCTCACTAATTGTGGACTAGAAGGAAAACTATCTTCCAACTTGTCTATGCTCTCGAATCTCAAAGAACTTCGTATCGGTAATAATATGTTTAATAGCCCTATTCCAACAGAGATAGGATTGCTATCTAGTCTTCAATTTCTTGAACTGAACAACGTTTCAGCTCATGGAGAAATTCCTTCTTCCATAGGTCAACTAAAGGAGCTAGTGCATCTTGATCTAAGAGCTAACTTTTTTAAGTTTAGTGTCCCTTATGAGATTGGCCTATGCACAAATCTAACTTTCCTGAGCTTAGCTGGTAATAATCTAACAGGTTCTTTGCCTTTATCATTAGCTAATTTGACCAAACTTACAGAACTAGGATTATCAGAAAATTCCTTTTCTGGTCAAATTGCTGCTTCATTGATCTCTAATTGGACTGAGTTAACTTCTTTGCAAGTCCAAAACAATAGATTAACAGGACCTGTTCCTCCACAGATTGGcttgttgaaaaaaattacactCCTTTATCTCtacaaaaataatttctctGGTCCTATTCCTAAAGAGATTGGAAACTTAAAGGAAATGACAGAGTTTGACCTTTCAGGAAACCATTTCTCCGGTCCAATTCCGCCAACCATTTGGAACCTCACAAACATGACAGTCATAAATCTTTTCTTCAACGACCTCTCTGGAAACATTCCAGTGGATATTGGAAACTTAACCTCATTGCAAATTTTTGATGTCGACAATAATAACTTGCATGGAACATTGCCACACACAATTTCTCAATTAACTTCCTTAGTTCATTTTTCTGTGTTCACCAATAAGTTTTCAGGTAGCATTCCCAGAGACTTTGGAAAGAACAGTCCTTCTTTAACTAAGGTTTACCTTTCAAACAATAGTTTCTCAGGAGAACTTCCTTCTTACATGTGCAGTGGCCTCAATCTTGGTGTTTTGAGCGTAAATAACAATAGCTTTTCAGGGCCATTGCCAAACTCCTTGAGAAATTGTTCATCCTTCACAAGAGTTAGGCTTGATGATAACCAGTTCAGTGGAAACATGACAGAAGCATTTGGAGTTTATCCAAATCTTAATTTCATCTCACTTAGCAGAAATCGTCTCCATGGCCATCTCTCTTCGGATTGGGGTAAATGTATAAACTTAACTGAGATGGAAATGAGTGGAAACAAACTTTCAGGGAGAATTCCATCAGAGCTGAGTAAGCTGAGTAAATTACAATTTCTTAGCTTGCACTCCAACGAATTTACCGGAAATATCCCACCTGAAATTGGAAATCTAAGCCTTCTCTACAACTTGAACTTGAGTAGGAACCATTTTTCAGGAGAGATCCCAAAGAGTATTGGAAGATTATCTAAGCTTAACTTTGTTGATTTATCTGATAACAACTTCAATGGAAGCATTCCAAAAGAGATCAGTAATTGTAATCAGTTGCTAAGTCTTAACTTAAGCCATAACAAACTATCTGGCGGGATACCTTATGAACTAGGCAATCTGTTCCAGCTCCAACCCATGTTAGATCTCAGCAGCAACAATCTTTTGGGAGAAATTCCTCAAAATCTTCAAAAGTTAGCATCATTGGAGATCCTCAATGTCTCACACAACAATCTATCTGGAACAATCCCACAATCCTTTTCAAGTATGTTCAGCCTTCAATCTGTGGATTTTTCTTATAACCACTTGTCAGGTTTGATCCCAACAGGTGgtgtttttcaaaaagaaaCTGCTGAAGCTTTTGTTGGGAATTCAGGTTTGTGTGGTGAGGTAAAAGGATTAACATGTGCCACAACATTGTCTCAAGAAAATTCTGGAGGGACCAACAAAAAGGTACTTATTGGTGTTACCACATCAGTTGTTGGAGTACTATTTATAGGGATGATTGGTTTTGGAATCCTACTATTTCAAAGAAAAGCCAAAAAACTTGGTGAAGAATCCAAAACCAATGAAGATAATGATCAATCTATTAGCATGGTATGGGGAAGAGAtgcaaaattcacattttctgATCTTGTGAAAGCAACCAACAACTTCAATGAAAAGTACTGCATTGGAAAAGGAGGATTTGGAAGTGTTTATAAGGCAGAACTAGCTACAGGTCAAGTTGTTGCCGTGAAAAGACTCAATATATCTGATTCTGGTGACATTCCAAAAGTGAATCACATGAGCTTCATGAATGAGATAAGAGCATTAACAGGAGTACGGCACCGGAATATAATAAAGCTTTATGGTTTCTGTTCTAGGAGGAAACAAATGTTCCTGGTTTATGAACATGTAGAGAGAGGAAGTTTGGGAAAATTGTTGTATGGAGGAGAAGGAAAATTGGAGCTAACTTGGGGTACAAGGGTAGAAATTGTGCAAGGAATAGCACATGCAATTTCTTACCTTCATAGTGATTGCTCTCCACCAATTGTGCACAGAGATATAACATTGAATAATATACTACTGGATTCAAATTTTGTACCTCATCTTGCAGATTTCGGCACAGCAAAACTTCTAAGCTCTAACAATTCAACCTGGTCCTCCGTTGCTGGATCTTATGGCTACATGGCTCCAGAGCTAGCACAAACTATGAGGGTGACTGAAAAGTGTGATGTGTATAGTTTTGGTGTCGTAGTGTTAGAGATATTAATGGGAAAACATCCTGAAGAATTCTTAGGTACCTTGTATTCAAACAAGTCTTTGACATTAATGGAAGTGCTTGTGAAGGATGTTGTAGACCAAAGGCTTCCACCTCCAACAGACACATTAGGTGAAACAATAGTGTTCACAATGAGAGTAGCTTTGGCTTGTACGCGAGCTGCTCCTGAGTCTAGACCCACGATGCGATCTGTTGCGCAAGAACTATCGGCTACTACACAGGCTTGTCTTTCTCTGCCATTTGGTATGATAACTGTAAGCAAGCTTACAGGATTCCAGAAATAG 3681 0.3752 MANIQNSIASVFYILLISLLPLKITSTLKTEAEALVKWKNSLTSPLPFPSPLSSWSLTNHINLCNWDAVVCDNTNTTILEINLSNANLSGTLTALDFASLPNLTLLNLNSNRFHGSIPSTIGNLSRLTFLDLENNLLEDTLPSELGQLRKLQHVSFYNNNFNGTIPYQLTNLPKVSYLELGSNFFVSSFDWSKYSNMPSLNYLGLEENRFTGEIPSFILECKNLTYLDLSQNNWNSKIPESVYGNLKRLEYLNLTNCGLEGKLSSNLSMLSNLKELRIGNNMFNSPIPTEIGLLSSLQFLELNNVSAHGEIPSSIGQLKELVHLDLRANFFKFSVPYEIGLCTNLTFLSLAGNNLTGSLPLSLANLTKLTELGLSENSFSGQIAASLISNWTELTSLQVQNNRLTGPVPPQIGLLKKITLLYLYKNNFSGPIPKEIGNLKEMTEFDLSGNHFSGPIPPTIWNLTNMTVINLFFNDLSGNIPVDIGNLTSLQIFDVDNNNLHGTLPHTISQLTSLVHFSVFTNKFSGSIPRDFGKNSPSLTKVYLSNNSFSGELPSYMCSGLNLGVLSVNNNSFSGPLPNSLRNCSSFTRVRLDDNQFSGNMTEAFGVYPNLNFISLSRNRLHGHLSSDWGKCINLTEMEMSGNKLSGRIPSELSKLSKLQFLSLHSNEFTGNIPPEIGNLSLLYNLNLSRNHFSGEIPKSIGRLSKLNFVDLSDNNFNGSIPKEISNCNQLLSLNLSHNKLSGGIPYELGNLFQLQPMLDLSSNNLLGEIPQNLQKLASLEILNVSHNNLSGTIPQSFSSMFSLQSVDFSYNHLSGLIPTGGVFQKETAEAFVGNSGLCGEVKGLTCATTLSQENSGGTNKKVLIGVTTSVVGVLFIGMIGFGILLFQRKAKKLGEESKTNEDNDQSISMVWGRDAKFTFSDLVKATNNFNEKYCIGKGGFGSVYKAELATGQVVAVKRLNISDSGDIPKVNHMSFMNEIRALTGVRHRNIIKLYGFCSRRKQMFLVYEHVERGSLGKLLYGGEGKLELTWGTRVEIVQGIAHAISYLHSDCSPPIVHRDITLNNILLDSNFVPHLADFGTAKLLSSNNSTWSSVAGSYGYMAPELAQTMRVTEKCDVYSFGVVVLEILMGKHPEEFLGTLYSNKSLTLMEVLVKDVVDQRLPPPTDTLGETIVFTMRVALACTRAAPESRPTMRSVAQELSATTQACLSLPFGMITVSKLTGFQK 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03724 1226 SUPERFAMILY RNI-like 522 819 - -
Tsu07g03724 1226 Gene3D Ribonuclease Inhibitor 28 190 IPR032675 -
Tsu07g03724 1226 Pfam Leucine rich repeat N-terminal domain 29 72 IPR013210 -
Tsu07g03724 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 528 1202 - -
Tsu07g03724 1226 Pfam Protein kinase domain 932 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03724 1226 SUPERFAMILY Protein kinase-like (PK-like) 906 1201 IPR011009 -
Tsu07g03724 1226 CDD STKc_IRAK 936 1201 - -
Tsu07g03724 1226 Gene3D Ribonuclease Inhibitor 191 386 IPR032675 -
Tsu07g03724 1226 Gene3D Ribonuclease Inhibitor 387 534 IPR032675 -
Tsu07g03724 1226 ProSitePatterns Protein kinases ATP-binding region signature. 936 958 IPR017441 GO:0005524
Tsu07g03724 1226 Gene3D Ribonuclease Inhibitor 535 855 IPR032675 -
Tsu07g03724 1226 ProSiteProfiles Protein kinase domain profile. 930 1209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03724 1226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1056 1068 IPR008266 GO:0004672|GO:0006468
Tsu07g03724 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 29 176 - -
Tsu07g03724 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 415 531 - -
Tsu07g03724 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 301 418 - -
Tsu07g03724 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 171 383 - -
Tsu07g03724 1226 SUPERFAMILY L domain-like 60 391 - -
Tsu07g03724 1226 Pfam Leucine rich repeat 759 814 IPR001611 GO:0005515
Tsu07g03724 1226 Pfam Leucine rich repeat 198 259 IPR001611 GO:0005515
Tsu07g03724 1226 SMART LRR_typ_2 537 560 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 656 680 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 318 342 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 704 728 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 487 511 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 439 463 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 124 148 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 100 123 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 366 390 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 197 221 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 777 800 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 801 826 IPR003591 -
Tsu07g03724 1226 SMART LRR_typ_2 270 294 IPR003591 -
Tsu07g03724 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 415 531 - -
Tsu07g03724 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 301 418 - -
Tsu07g03724 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 171 383 - -
Tsu07g03724 1226 Gene3D Phosphorylase Kinase; domain 1 890 1010 - -
Tsu07g03724 1226 Gene3D Transferase(Phosphotransferase) domain 1 1011 1210 - -
Tsu07g03724 1226 SUPERFAMILY RNI-like 286 598 - -
Tsu07g03724 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 29 176 - -
Tsu07g03724 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 528 1202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03724 Tsu-Chr7 43453962 43457981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03724 511 819 Receptor kinase-like Gene Family AT4G08850 33.333 9.89e-35 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu07g03724 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03724 - - gmx:100809137 1740.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03724 07 43453962 43457981 Tsu07g03724 07 43453962 43457981 ECH