Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03702 ATGGATCATGTGATTGGTGGGAAGTTTAAATTGGGAAGGAAAATTGGAAGTGGGTCTTTTGGAGAGCTTTATATAGCTGTTAATGTACAAACTGGAGAGGAAGTTGCTGTTAAGCTGGAGCCTGTCAAGACCAAGCATCCACAGCTTCACTATGAATCAAAATTGTATATGCTACTTCAAGGAGGAACGGGGGTACCTCACCTCAAGTGGTTTGGAGTGGAGGGAGAATATAATGTGATGGCAATTGACCTTCTTGGACCTAGTCTGGAAGATCTGTTCAATTATTGCAACCGGAAGTTAACATTGAAGACGGTGTTAATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATAAAGCCAGACAATTTTTTAATGGGCCTTGGACGTAAAGCAAACCAGGTCTACATCATTGACTATGGCCTCGCCAAAAAATTCAGAGATCTTCAGACTCATAAGCACATACCATACCGGGAAAACAAGAACCTTACAGGGACAGCTCGATATGCGAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTTCTCATGTACTTCTTAAGAGGAAGtCTTCCTTGGCAGGGACTGAAGGCAGgcaccaaaaaacaaaaatatgataaaattagtgAGAAGAAGATGTCAACCTCCATAGAGGTGCTTTGCAAATCATATCCCTCAGAGTTTGTATCATACTTTCACTACTGTCGATCATTGCGGTTTGAAGACAAGCCTGACTATTCATATTTGAAGAGGCTTTTTCGTGATCTATTTATTCGAGAAGGTTATCAATTTGACTATGTTTTCGACTGGACTATATTGAAGTATCCACAGATTAGTGGCAGCTCTAGAGGACGGCATGACAGTGGCAAGGCGGCTATGAATGCAGGGCCATCTGTACAGAAGCCAGAAAAGATTTCTGTTGGGAAAGAGCTTCGAGAGAGATTCACTGGTGCTGTTGAAGCATTCTCGCGGAGGAACCCAAGTCCCCGTGGTGAACACTCCAAACATAGGGGTTATGAGGATGCAGCAGCCATACACAAGGATGCgTATCATGATCAAGAGAAGGGACGCAGCTCCGCTCGATATGGAAGCAGTTCAAGAAGACCAATAATTTCATCATCAACCAGGCCAAGCTCCTCAGGTGATCATACGGACAGTCGTACTGGCTGGCTGACCTCATCTGGCAGCCGTCCATCTACCGCACAGAGATTTCAACCTGTGACCTCATCTGGCAGCCGTCCATCTACCGCACAGAGATTTCAACCTGTGTATGAGACCAAACAGCCAACCTATACGCGGTCGGGATCTACTAGAGGCAACCACGACGATCCTCTGCGGTGTTTTGAAGTCCTCTCTATCAGGAAGTAA 1428 0.4377 MDHVIGGKFKLGRKIGSGSFGELYIAVNVQTGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGVPHLKWFGVEGEYNVMAIDLLGPSLEDLFNYCNRKLTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKFRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMSTSIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQISGSSRGRHDSGKAAMNAGPSVQKPEKISVGKELRERFTGAVEAFSRRNPSPRGEHSKHRGYEDAAAIHKDAYHDQEKGRSSARYGSSSRRPIISSSTRPSSSGDHTDSRTGWLTSSGSRPSTAQRFQPVTSSGSRPSTAQRFQPVYETKQPTYTRSGSTRGNHDDPLRCFEVLSIRK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03702 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Tsu07g03702 475 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Tsu07g03702 475 MobiDBLite consensus disorder prediction 379 458 - -
Tsu07g03702 475 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03702 475 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03702 475 PANTHER CASEIN KINASE-RELATED 1 429 - -
Tsu07g03702 475 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
Tsu07g03702 475 MobiDBLite consensus disorder prediction 346 378 - -
Tsu07g03702 475 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Tsu07g03702 475 MobiDBLite consensus disorder prediction 325 339 - -
Tsu07g03702 475 MobiDBLite consensus disorder prediction 300 465 - -
Tsu07g03702 475 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 429 - -
Tsu07g03702 475 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g03702 475 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03702 Tsu-Chr7 43200127 43205390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03702 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 2.41e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tsu07g03702 Pkinase 1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03702 K08960 - cam:101493293 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03702 07 43200127 43205390 Tsu07g03702 07 43200127 43205390 ECH