Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03697 aTGGGTTTGAGAGACATAGGAGCTTCACTACCTCCTGGATTTAGATTTTATCCAAGTGATGAAGAATTGGTTTGTCACTATCTTTACAAAAAGATCACAAATGAGGAAGTTCTTAAGGGTACTTTGATTGAAATTGATCTTCACATATGTGAACCATGGCAACTTCCTGAGGTGGCAAAGCTAAATGCAAATGAATGGTATTTCTTTAGCTTTAGGGACCGTAAATATGCAACTGGATTTAGAACAAATAGAGCAACTATATCTGGGTATTGGAAAGCAACTGGAAAAGATCGTACGGTGTTAGATCCAATCACACAAGAGGTTGTAGGAATGAGGAAGACATTGGTGTTCTATAGGAATAGAGCTCCAAATGGTATTAAAACTGGATGGATTATGCATGAATTTCGTTTGGAGACACCACACATGCCTCCTAAGGAGGACTGGGTGTTGTGTAGAGTCTTTCACAAAAGCAAAGAAGAAGACAACAACATTAACAATTCCAAACTCaacacacaacaacaacaactcatTTCCAAAGGTGATGATGGATATGGATTCTTGTGGAACATGGATTTGGAAGAAAATAGCCTAGTAGATGATGGTGTGGCTTCAAACTTGGATGCAATAAGATTTGAgGATGGCCCATTTGGGAATAATGGGAACTCTAATAGttcatcaactatatataggctatggtccAATATACCGGACACGCTGCGTATCGactcttctccccatctgaagaatcCTAAAGGCATAAGAGTCCAGGTTGAGGAAAGAACCACAAGCCACCGGATGCTTGTCACCCGATTTCTCATTCCTTGTGTTTCAGGAGCAATATGCGTCATCCGCCGCTCTCTTTGCATTTCAGGATCGCTGCCGAGAGACTACGATTTGTTCACATTTAGTTAG 912 0.3728 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEVLKGTLIEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATISGYWKATGKDRTVLDPITQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKEEDNNINNSKLNTQQQQLISKGDDGYGFLWNMDLEENSLVDDGVASNLDAIRFEDGPFGNNGNSNSSSTIYRLWSNIPDTLRIDSSPHLKNPKGIRVQVEERTTSHRMLVTRFLIPCVSGAICVIRRSLCISGSLPRDYDLFTFS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03697 303 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Tsu07g03697 303 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 162 214 - -
Tsu07g03697 303 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 167 - -
Tsu07g03697 303 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 162 214 - -
Tsu07g03697 303 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 167 - -
Tsu07g03697 303 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Tsu07g03697 303 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Tsu07g03697 303 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03697 Tsu-Chr7 43129795 43139935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03697 6 159 NAC Transcription Factor Family AT1G56010 59.259 3.91e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu07g03697 NAM 1.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03697 - - tcc:18613123 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03697 07 43129795 43139935 Tsu07g03697 07 43129795 43139935 ECH
Tsu07g03697 07 43129795 43139935 Tsu01g02731 01 31427997 31432853 PCT