Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03695 ATGACACATCTTTCAGTTCCGCCTGGTTTTGCATCCCTAACATCTTTTCATCTCGAAAGGGATGACAAGGTTAAGAAAACCGATAAGTCTGACCCAATCCCGACAGAGACTAATCTTGAGATGGATGACAATGCttcatataatcatatttataCACAACGGCCGTGGATAATATTGGACCAGAGCAAGCGCAAACCTGAGGAATCTCACAGAGAACATCTTCCTGCGGTTAAGTTGAATTCCCTTACAAATTCTTCTCGTCCAAAAGGGGTCACATACGGATGTCCAAACTGCAGTAATTGTATAAAGGTAACAGCGAGGTGGCATCCTGAGGATGCAAGAAGAGAAATTCTGGAGGAAGCTCCCATATTCTGTCCAACAGAAGAGGAATTCAAAGACACGCTTAAATATATCGCAAGCATACGTTCAAGAGCAGAACCTTATGGAATTTGCCGTATAGTCCCTCCTACTAGCTGGGAACCACCATGTACTCCTGAGAAAAAGAATATATTGGAAAACTCTGAATTTGTTGCTCAAATTCGGCGAATTGATGGGCACGAAATTCAGCATGCACCAGAAACTATGGCTAGCTCTCATGATACTACAGAAACCAAGAGAAGAAAAGTGATGAAAGTAGCCACGGACTCTCATCTTGGTAATAGAAGCACTTGCACCCCTAATAGCAGGAATGTTGAAAGCGGTGACAATGAGACTGAACATGGTCTTAAATTCACtatcaaaacatttaagaaattGGCAGATGAATTTGAAATCCAATACTTCAACTACAAGAATAAGAATAAGATTATGGGTTCCGATAAAAACTCAATACATCTACAGCACTGTGAACCATCTGTTGAGAATATTGAGGATGAATACAGACGTATTGTTCAAAATCCAACTGAAGAAATTGAGGTTCTCTGTGGTGACACTTTGGAGGCTGGAGATTTTAGCAGTGGATTTCCAGTTCCAACGGTTTCTGATCCTCAAAAGGCGAATACTTACCCTGAATATTTGAAATCTGGATGGTACTTAAATAATATGCTTTCACTCCCAggttctcttctttcttttgaaAGACCTGAAGTTGCACGTAAATTTTCCCCTAGGGTACAAGTAGGAATGTGTTTTTCTCCACTCAAATGGAAAGTTGAAGAGCACCAATTATACTCATTGTGTTGCTTGCATTTGGGTGAACCCAAAGTATGGTATAGTGTCCCAGGAAGATTTGCTGCCGACTTTGAAACAATTTGGAAGAAGTATCTCCGAGCGCTAAATATGTATGCAGGAGAGTCTGATATGCATGATAATCTGGCTATGCAGTTATCCTGCTCAATATTGAAGGAAGCGGGTATACCAGTATACCGTTGCGTACAGCATCCTGGTGAGTTTGTTCTTGTCTTACCTGGAGCATATCATTCAGGATTTGATTGTGGTTTCAACTGTTCTGAAGTAGCAAGTTTTGCTCCTCTTGAGTGGCTTCCACATGGACAAAATGTAGTAGAACTATATTGTGAACAGAAGAGAAAGACATTAATTTCATACGATAAGCTGTTACTGGGAGCAGCAAGGGAAGCTGTGAGGGCCCGATGGGAAATTGATATATGTATGAAGAGCACGCCCGATAACTTAACATGTAAAGATGCTTATCAAAGAGATGGGATCTTAGCAAAAGCTTTGAATTCTCGCATCACGAGTGAAAATTTGAAGAGGAAATTCATTTCCACTTATGACAAGTTTGCGTGTCTTGATCATGTGAAACAGCTTTGTTCTTGCCCTTGGTCAAACAAAATTCTCCTCTACCGTTATGAAATCAGGGAATTGGAGGTTCTTCAGCAAGCTTTGGATGGAAAACTAAGTTCAGTCTATAAATGGGCTAAAGAGGATCTTGGTTTAACTGTGCGCTCAGTTGCCTCCAAGAGATCAAAAGAAACCCCATTAAAAGTAAATGATTCAGAAGGCTTGTTGAAAGAACCTATATCGCGGTCGCGGTGGGCACAAGAGGCATACAACAAGTGGAAACGGTGTGCATCGCAGGCAACACCAAATGCTTCGGAGGGGAAACCAAGAGAAAAGGCCTTCCAAACCAAGCAGACTCCGAGTAGCACTCACAATAGTTCGTGTGCCATTCAACCAAAAAAGAATACAACTTTACTTCATTCAACAATATCAAATGAGATCAAAGCTGAAGAAAAAATGGTGAGGCACAATTCTGTTGCAACAAGCATTGGCGAAGGAAGTAATTCTGCTGGGATCAAACCTGATAGCAAGGCAATTGAAGATAAGTTCACTACTTCAAAGAAAGTAGGAGACCCAAAAGTTTCTGAAACTCCACGCTCGCGTTTCTTGTCTTTTGTACAGGAAAACATTTTGGTTGAAGTTTCGTCTAGTTCTTCAGATTCCGATTAG 2409 0.4031 MTHLSVPPGFASLTSFHLERDDKVKKTDKSDPIPTETNLEMDDNASYNHIYTQRPWIILDQSKRKPEESHREHLPAVKLNSLTNSSRPKGVTYGCPNCSNCIKVTARWHPEDARREILEEAPIFCPTEEEFKDTLKYIASIRSRAEPYGICRIVPPTSWEPPCTPEKKNILENSEFVAQIRRIDGHEIQHAPETMASSHDTTETKRRKVMKVATDSHLGNRSTCTPNSRNVESGDNETEHGLKFTIKTFKKLADEFEIQYFNYKNKNKIMGSDKNSIHLQHCEPSVENIEDEYRRIVQNPTEEIEVLCGDTLEAGDFSSGFPVPTVSDPQKANTYPEYLKSGWYLNNMLSLPGSLLSFERPEVARKFSPRVQVGMCFSPLKWKVEEHQLYSLCCLHLGEPKVWYSVPGRFAADFETIWKKYLRALNMYAGESDMHDNLAMQLSCSILKEAGIPVYRCVQHPGEFVLVLPGAYHSGFDCGFNCSEVASFAPLEWLPHGQNVVELYCEQKRKTLISYDKLLLGAAREAVRARWEIDICMKSTPDNLTCKDAYQRDGILAKALNSRITSENLKRKFISTYDKFACLDHVKQLCSCPWSNKILLYRYEIRELEVLQQALDGKLSSVYKWAKEDLGLTVRSVASKRSKETPLKVNDSEGLLKEPISRSRWAQEAYNKWKRCASQATPNASEGKPREKAFQTKQTPSSTHNSSCAIQPKKNTTLLHSTISNEIKAEEKMVRHNSVATSIGEGSNSAGIKPDSKAIEDKFTTSKKVGDPKVSETPRSRFLSFVQENILVEVSSSSSDSD 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03695 802 MobiDBLite consensus disorder prediction 694 714 - -
Tsu07g03695 802 MobiDBLite consensus disorder prediction 680 714 - -
Tsu07g03695 802 SMART cupin_9 340 505 IPR003347 -
Tsu07g03695 802 MobiDBLite consensus disorder prediction 755 775 - -
Tsu07g03695 802 MobiDBLite consensus disorder prediction 216 236 - -
Tsu07g03695 802 MobiDBLite consensus disorder prediction 742 777 - -
Tsu07g03695 802 Pfam C5HC2 zinc finger 577 609 IPR004198 -
Tsu07g03695 802 Pfam JmjC domain, hydroxylase 371 487 IPR003347 -
Tsu07g03695 802 Gene3D Cupin 106 489 - -
Tsu07g03695 802 ProSiteProfiles JmjC domain profile. 340 505 IPR003347 -
Tsu07g03695 802 SUPERFAMILY Clavaminate synthase-like 241 532 - -
Tsu07g03695 802 Pfam jmjN domain 122 155 IPR003349 -
Tsu07g03695 802 MobiDBLite consensus disorder prediction 216 232 - -
Tsu07g03695 802 ProSiteProfiles JmjN domain profile. 121 162 IPR003349 -
Tsu07g03695 802 PANTHER LYSINE-SPECIFIC DEMETHYLASE 68 576 - -
Tsu07g03695 802 PANTHER LYSINE-SPECIFIC DEMETHYLASE 577 717 - -
Tsu07g03695 802 PANTHER INACTIVE LYSINE-SPECIFIC DEMETHYLASE JMJ19-RELATED 68 576 - -
Tsu07g03695 802 PANTHER INACTIVE LYSINE-SPECIFIC DEMETHYLASE JMJ19-RELATED 577 717 - -
Tsu07g03695 802 SMART JmjN_1 120 161 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03695 Tsu-Chr7 43110131 43113671 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03695 5 644 JUMONJI Transcription Factor Family AT1G08620 43.043 1.17e-158 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tsu07g03695 JmjC 4.2e-30 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03695 - - gmx:100804864 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03695 07 43110131 43113671 Tsu07g03695 07 43110131 43113671 ECH