Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03665 ATGGAAGGagatagaaataataataatgcagaGGTAAGATACAGAGGAATTCGTAGAAGACCATGGGGTAAATTTGCAGCTGAAATTCGTGATCCAACAAGAAAAGGTTCTCGTATTTGGCTTGGAACATTTGATACAGCTGAACAAGCTGCACGTGCTTATGATTCTGCTGCTTTTCATTTTCGTGGTCATAGAGCTATTCTTAATTTTCCAAATGATTTTGCTCATTCTAGTACTAATTATAATGTTTCAAATACTACTTCAATTACATCaaataatacattgtctagttCTTCTTCCCAAATTTcctatcaacaacaacaacaaggtgATGATGATGCTACTTTTGATGAATTGGCTTTCTTGGATAACAAGTTATTGGAAGAACTACTTGATCAGGTGGTGCAAGATGATGGTACAAGTAGCTCTAGAAATTGA 438 0.3059 MEGDRNNNNAEVRYRGIRRRPWGKFAAEIRDPTRKGSRIWLGTFDTAEQAARAYDSAAFHFRGHRAILNFPNDFAHSSTNYNVSNTTSITSNNTLSSSSSQISYQQQQQGDDDATFDELAFLDNKLLEELLDQVVQDDGTSSSRN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03665 145 PANTHER DNA-BINDING DOMAIN 8 101 IPR044808 GO:0003700|GO:0009873
Tsu07g03665 145 MobiDBLite consensus disorder prediction 92 111 - -
Tsu07g03665 145 Pfam AP2 domain 13 64 IPR001471 GO:0003700|GO:0006355
Tsu07g03665 145 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Tsu07g03665 145 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Tsu07g03665 145 CDD AP2 13 73 IPR001471 GO:0003700|GO:0006355
Tsu07g03665 145 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 8 101 - -
Tsu07g03665 145 SUPERFAMILY DNA-binding domain 13 72 IPR016177 GO:0003677
Tsu07g03665 145 SMART rav1_2 13 77 IPR001471 GO:0003700|GO:0006355
Tsu07g03665 145 Gene3D AP2/ERF domain 12 72 IPR036955 GO:0003700|GO:0006355
Tsu07g03665 145 ProSiteProfiles AP2/ERF domain profile. 13 71 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03665 Tsu-Chr7 42881824 42882261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03665 8 132 AP2-EREBP Transcription Factor Family AT3G23230 53.175 1.73e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tsu07g03665 AP2 2.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03665 - - gmx:100778998 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03665 07 42881824 42882261 Tsu07g03665 07 42881824 42882261 ECH
Tsu07g03665 07 42881824 42882261 Tsu01g02703 01 30651682 30652128 PCT