Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu07g03664 | ATGTTTTTCTTCAACAACATTGACTCTGATTCTTCATCCTCTAGTGGTGAAATGGATTTACAAAAGCCCACGTACAATCTTACATACAATGGGCATGTCAAAGAAGAAAATCCACCACCACCAGTATCAATTGCtccaaaaaccctaaatccaCAACCGACACCATTTAAACGAGAGAAAAGGCTCTATAGAGGAGTGAGGACACGACCATGGGGAAAATATGCAGCAGAGATAAGGGACACAACAAGAAATGGTGTTCGAGTGTGGATTGGAACATTTGACACACCTGAAGCAGCTGCTTTAGCTTATGACCAAGCAGCTTTCTTAACACGAGGATGTAGGGCAATCCTTAATTTCTCCGAACATGTTGTGAAGGAATCTCTTCAAACCATGAATTTGAAGACATTGCTAAATCGCGGTAGCTCACCCTTGTTGGAACTTAAAAGGATGCATGTCTTGAGAACAAGATCTAAGACAACTTGTAGTAAAAAGGTTAAAAGGGATTCCAAGAATGGTGTGTTGAAAAATGCTCAAAATGTGTTGGTGTTGGAAGATATGGGTTCTGAATATCTAGAGCAACTTTTGATGAGCTCTATTTGA | 600 | 0.3883 | MFFFNNIDSDSSSSSGEMDLQKPTYNLTYNGHVKEENPPPPVSIAPKTLNPQPTPFKREKRLYRGVRTRPWGKYAAEIRDTTRNGVRVWIGTFDTPEAAALAYDQAAFLTRGCRAILNFSEHVVKESLQTMNLKTLLNRGSSPLLELKRMHVLRTRSKTTCSKKVKRDSKNGVLKNAQNVLVLEDMGSEYLEQLLMSSI | 199 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu07g03664 | 199 | Gene3D | AP2/ERF domain | 62 | 122 | IPR036955 | GO:0003700|GO:0006355 | |
Tsu07g03664 | 199 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Tsu07g03664 | 199 | MobiDBLite | consensus disorder prediction | 35 | 55 | - | - | |
Tsu07g03664 | 199 | ProSiteProfiles | AP2/ERF domain profile. | 62 | 120 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu07g03664 | 199 | PRINTS | Ethylene responsive element binding protein signature | 86 | 102 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu07g03664 | 199 | PRINTS | Ethylene responsive element binding protein signature | 63 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu07g03664 | 199 | PANTHER | DNA-BINDING DOMAIN | 51 | 196 | IPR044808 | GO:0003700|GO:0009873 | |
Tsu07g03664 | 199 | SMART | rav1_2 | 62 | 126 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu07g03664 | 199 | CDD | AP2 | 63 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu07g03664 | 199 | Pfam | AP2 domain | 63 | 108 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu07g03664 | 199 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 51 | 196 | - | - | |
Tsu07g03664 | 199 | SUPERFAMILY | DNA-binding domain | 62 | 121 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu07g03664 | Tsu-Chr7 | 42866364 | 42866963 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu07g03664 | 57 | 198 | AP2-EREBP Transcription Factor Family | AT3G23240 | 52.817 | 2.50e-45 | 147 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Tsu07g03664 | AP2 | 1.9e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu07g03664 | K14516 | - | gmx:100818907 | 189.504 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu07g03664 | 07 | 42866364 | 42866963 | Tsu01g01466 | 01 | 14136119 | 14136873 | PCT | |
Tsu01g02710 | 01 | 30823784 | 30824104 | Tsu07g03664 | 07 | 42866364 | 42866963 | PCT |