Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03651 ATGCTTCCTATTCCCACTGATTCTCCTCCGGCACCGTCCAACAAACATTTCAGAGGAGTCCGTAAACGTCCATGGGGCCGTTTCGCCGCCGAGATCCGCGATCCATGGAAAAAAACTCGCAAATGGCTCGGCACCTTCGACACCGCCGAAGAAGCCGCAAGAGCCTACGACGAAGCTGCTAGAGCTCTCCGTGGACCAAAAGCGAAAACCAACTTCTCTTACTTCGTCGCTCCACTTCCTCAGCCCCATGGCGGTGGTAATAGGAGGCCGGTTGAGTTTTGGGGTCCGCCGGTTTATTTCAACGCCGGTGGTGCTCCGGTGAGGTCAGAGTATAAGGGTTATAAGTTGGAGAATATTGTGGTGAGTAAGGAAGAAGTGGAAGAGAAGAAACCGTTTTTGTTTGATCTTAACTTGCCGGCGCCGCTTGTTTGA 432 0.5255 MLPIPTDSPPAPSNKHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDEAARALRGPKAKTNFSYFVAPLPQPHGGGNRRPVEFWGPPVYFNAGGAPVRSEYKGYKLENIVVSKEEVEEKKPFLFDLNLPAPLV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03651 143 Gene3D AP2/ERF domain 15 74 IPR036955 GO:0003700|GO:0006355
Tsu07g03651 143 MobiDBLite consensus disorder prediction 1 20 - -
Tsu07g03651 143 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Tsu07g03651 143 CDD AP2 15 72 IPR001471 GO:0003700|GO:0006355
Tsu07g03651 143 SUPERFAMILY DNA-binding domain 16 74 IPR016177 GO:0003677
Tsu07g03651 143 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Tsu07g03651 143 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Tsu07g03651 143 Pfam AP2 domain 16 65 IPR001471 GO:0003700|GO:0006355
Tsu07g03651 143 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Tsu07g03651 143 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 88 - -
Tsu07g03651 143 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03651 Tsu-Chr7 42721113 42721857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03651 17 72 AP2-EREBP Transcription Factor Family AT1G50640 91.071 4.92e-30 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tsu07g03651 AP2 2.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03651 K09286 - gmx:100816599 188.734