Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03647 atggCGGTTGCTTTGTCTGAAGTTGAGCTTAAAGTTCAAGCtatgaacaagaaaaaaactACTATTTCAAGAAGTTGGATTTTGCTAGACCGTGATGGAAGAGACACAGTATTAGATGTTGATAAGTATGCTATTATGCGCCTTGTTGAAATTCACGCAAGAGATCTTCGAATTATGGATCCTCTTCTTTCATATCCTTCAACCATTCTTGGCAGAGAGAAAGTCATTGTTCTCAATCTAGAGgcaaacacaaaaaacaaaaacaatcataacttgttctgtttttgctctgttctgttctgttttttttatgttagttttgtttttgttttgcagCATATAAAAGCTATTATTACTGCTGAAGAAGTATTGGTTAGAGACCCAATGGATGATGATGTTGTGCCAGTTGTTGAAGAGCTAAGAAGAAGGTTACCAATTAAGGTAAGTGGTCAAGGACAAGGAGAAGAAGAATCATGTGCTCAAGATAGTGAAGAAAATGaAATTCCATTTGAGTTTCGTGCTTTGGAAGTTATATTAGAGGGAATATGTAGTTTTCTTGATGCACGAACAAGAGAGTTAGAGACTGCTGCTTATCCTGCTTTGGATGAACTAACCTCTAAGATCAGCAGTCGTAATTTGGATAAAGTACGAAAATTAAAAAGTGCAATGACTAGGTTGACCAATCGTGTTCACAAGATAAGGGAGGAATTAGAAAACCtacttgatgatgatgatgacatgGCTGAACTTTACTTATCAAGAAAGTTAGCTGTTTCAACCTCTCCCTCAAGTAATAATTCTGATGGTCCCAATTGGCATCACAGTCCAAATCAAAGTTCTAAAAGACACAAATCAAGCAGAGGAAGTGCAACAACACTTCAAGAGGAAAATGATGTTGAAGAGCTTGAAATGTTACTAGAGGCCTATTTCATACAAATTGATGGCACATTAAATAAACTGACCACGGTACGAGAATATATTGATGACACGGAAGATTACATCAACATACAGCTTGATAATCACAGAAATCAACTGATTCAGTTAGAGCTGTTCCTAAGTTCAGGGACTGTTTGTTTTTCCATATATTCATTGGTGGCTGCAATATTTGGTATGAACATTCCATATACATGGAATAAGGGTCACGGACATGTATTTAAATGGGTGGTGATTCTTACGGGAATGGCTTGTGGATCATTCTTTTTATCCATAGTATCGTATGCTCGACGCAAAGATGAAGAGGAATCAGAGGCACACATGACTGAGAATGATCATGGATCCGATCAAGGTCCATTATTGATGATGCCTACTACAAAGGATGAATTTGGTAAGCAAGAAGGATGGTATTTGGACACATGTTGTTCAAATCACATGACTAGTAACAAGGAGTGGCTTGTTAACTATGATTCTTCAAAGAAGTCAACAATTCGATTTGCTGACAGTAGAACAGTAAAATCAGAAGGAATTGGTGATATGTTAATCAAGGGAAAGGATGGTAATCAAGTATTGATTACTGGTGTGATGTATGTACCAGATGTGCCATCAAATATTCTATGCATTGAACAGTTGGTTGAGAAAGGTTTCACATTGTGCTTAGGAAACAATCAGATGAAAGTATACAATGTGGAAAATAAGATGGTATTTTGTGCATCATTATCACGAAGCAGAATTGTCCAAGTTAAATTTGAGAATTCAAATAGTGAAGTCTTAATTGAGGAGGAGAGTGATAAATCAATTAAGATTTTAAGGACAGATGGTGCTAGTAAGCACACATCTAAGGAGTCTGATAGTGAACATCAGAAAGTGCACATCAGTGAAGATGTGATAAGGAATGAGGTGCATATCAATGAAGACAGTGAAAGTGACTGTAATGCTGAGACAGATGTTGAAGCACCAGAAGCTGAAGTATCAGTTGTTGAGGCTAATGTAGAAATAAGAGCCGGATCAACAAAGGCAAGAGAATCAGATGTGgaagcagatgttgaagcatcagaagctgaaGTTGAAGCATCAGAGTTTGAGGTTAATGTAAAAACAGAAGTCATATCAACAAGGAAAAGACAAGTTCCAGCTAGGTGGCAAGAATGTGAGCTTGCAGATGACAGTAAAGTCAGTAAAGAAGGTGAATTAATGCAGTGTGCATTATTGGTTGATGAACCAGTGACTAAGTCAAAAGCTATGACAGATGTAGGCATAGTATCTTGTTTCTTAAGAAATAAATTGCTTAGAACAAGAGGGTTAATGCTACATCAGAAGAAGTATGCTAGAGAAATATTGAGAAGATTCAATATGGTTGAAAGTAAGACAGCCATGGAAATGAATCTCAAGCTAGAAAATCAAAGCAAAGAAGCAAATTGTAGAATCAAAGTGAAGAATCATGGTGAAGATCCTACAATAATCAAGAAAGTTGCTAGATGTTTGAGATATCTGTACAAGAGTAGGCAAGATATATGCCTTGTTAAAGGCTTGGTGAGTAGACTCAAGGAGAATACTAGAAAGTCACATATGAATCATGTAGCCAGAAGAATTCTGAGATACATAACAGGTACACTAGAATTTGGAATTCTCCTTCCAAAGTTAGCAAGGAATGCAAAGCCAGAGATAAAGATTGTTTGGTTTTCTGATGTTGACTGGTGTGGAGAAAAGGTGGACAGGAGGAGCACAAGTGGCTATGTGTTTAAGTTCCAAAATGCATCAGtttcatggtgttctaagaagcaatcagtgattgctttgtctagctgtgaagcagagtatgttgcaggctctctagctgcttgtcaagctaattga 2790 0.3376 MAVALSEVELKVQAMNKKKTTISRSWILLDRDGRDTVLDVDKYAIMRLVEIHARDLRIMDPLLSYPSTILGREKVIVLNLEANTKNKNNHNLFCFCSVLFCFFYVSFVFVLQHIKAIITAEEVLVRDPMDDDVVPVVEELRRRLPIKVSGQGQGEEESCAQDSEENEIPFEFRALEVILEGICSFLDARTRELETAAYPALDELTSKISSRNLDKVRKLKSAMTRLTNRVHKIREELENLLDDDDDMAELYLSRKLAVSTSPSSNNSDGPNWHHSPNQSSKRHKSSRGSATTLQEENDVEELEMLLEAYFIQIDGTLNKLTTVREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCFSIYSLVAAIFGMNIPYTWNKGHGHVFKWVVILTGMACGSFFLSIVSYARRKDEEESEAHMTENDHGSDQGPLLMMPTTKDEFGKQEGWYLDTCCSNHMTSNKEWLVNYDSSKKSTIRFADSRTVKSEGIGDMLIKGKDGNQVLITGVMYVPDVPSNILCIEQLVEKGFTLCLGNNQMKVYNVENKMVFCASLSRSRIVQVKFENSNSEVLIEEESDKSIKILRTDGASKHTSKESDSEHQKVHISEDVIRNEVHINEDSESDCNAETDVEAPEAEVSVVEANVEIRAGSTKARESDVEADVEASEAEVEASEFEVNVKTEVISTRKRQVPARWQECELADDSKVSKEGELMQCALLVDEPVTKSKAMTDVGIVSCFLRNKLLRTRGLMLHQKKYAREILRRFNMVESKTAMEMNLKLENQSKEANCRIKVKNHGEDPTIIKKVARCLRYLYKSRQDICLVKGLVSRLKENTRKSHMNHVARRILRYITGTLEFGILLPKLARNAKPEIKIVWFSDVDWCGEKVDRRSTSGYVFKFQNASVSWCSKKQSVIALSSCEAEYVAGSLAACQAN 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03647 929 CDD RNase_HI_RT_Ty1 870 928 - -
Tsu07g03647 929 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 11 411 - -
Tsu07g03647 929 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 11 411 IPR039204 -
Tsu07g03647 929 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 351 400 IPR045863 -
Tsu07g03647 929 CDD Mrs2_Mfm1p-like 26 410 IPR039204 -
Tsu07g03647 929 Pfam CorA-like Mg2+ transporter protein 300 397 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tsu07g03647 929 Gene3D Magnesium transport protein CorA, transmembrane region 136 345 - -
Tsu07g03647 929 Gene3D - 9 83 - -
Tsu07g03647 929 Coils Coil 216 243 - -
Tsu07g03647 929 MobiDBLite consensus disorder prediction 259 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03647 Tsu-Chr7 42686125 42693969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03647 18 388 MRS2 Gene Family AT5G64560 66.404 2.01e-146 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03647 K16075 - gmx:100799368 533.102