Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03641 ATGAGCATGGAAGTTGTGGTTGGCATGAAGAAGGAGAAAATGGAGTTTGAGGAAACTGAGCTGAGACTTGGAATTGGATCAACCAAAGCTAGTGAAGAAGTCGTAAGGAAGAGAGGATTTTCTGAGACTGAaaatcatgatgatgatgagaacaCTACTATGGATTTGATGCTTAATCTTTCCTCTAAGGAAGCTAGTGGTGAGATAGATCCAAGTGATAAGATCAAGAATTTGCAAAAAGAGAAGACTCTTTTGCCTGATCCTGCCAAGCCTCCTACAAAGACTCAAGTGGTGGGTTGGCCACCTGTTCGGTCGTACCGGAAGAACATGTTAGCAATGCAAAAGAGTACTAATAATGAAACTGAGAAGAACAACAATATTGCAATTAGCTTTGTCAAAGTTAGCATGGATGGAGCACCTTATCTTCGCAAAGTCGACTTAAAGATGTATAAAAGTTACTCACAACTTTCTGATTCCTTAGGCAAAATGTTCAGCTCTTTCACCCTTGGCAACTGTGAATCACAAGGAATGAAGGATTTCATGAATGAGAGTAAGTTGATGGATCTTTTAAACAATTCTGATTATGTCCCAACCTATGAAGACAAGGATGGTGATTGGATGCTTGTGGGTGACGTCCCATGGGAGATGTTTGTTGAATCATGCAAACGTTTGCGTATCATGAAAGGAAAGGAGGCTATTGGCATTGCACCAAGAGCCATGGAGAAGTGCAAGAACAGAAGCTAG 744 0.3992 MSMEVVVGMKKEKMEFEETELRLGIGSTKASEEVVRKRGFSETENHDDDENTTMDLMLNLSSKEASGEIDPSDKIKNLQKEKTLLPDPAKPPTKTQVVGWPPVRSYRKNMLAMQKSTNNETEKNNNIAISFVKVSMDGAPYLRKVDLKMYKSYSQLSDSLGKMFSSFTLGNCESQGMKDFMNESKLMDLLNNSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGIAPRAMEKCKNRS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03641 247 Pfam AUX/IAA family 18 238 IPR033389 -
Tsu07g03641 247 Gene3D - 123 240 - -
Tsu07g03641 247 ProSiteProfiles PB1 domain profile. 129 229 IPR000270 GO:0005515
Tsu07g03641 247 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 240 IPR003311 GO:0005634|GO:0006355
Tsu07g03641 247 PANTHER AUXIN-INDUCED PROTEIN AUX28 7 240 - -
Tsu07g03641 247 SUPERFAMILY CAD & PB1 domains 131 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03641 Tsu-Chr7 42633802 42637688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03641 117 232 B3 DNA Binding Superfamily AT3G61830 31.897 8.76e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Tsu07g03641 AUX_IAA 4.1e-82 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03641 K14484 - gmx:547965 362.459